Rhizobium sp. AB2/73: I8E17_04800
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Entry
I8E17_04800 CDS
T10377
Symbol
hupB
Name
(GenBank) DNA-binding protein HupB
KO
K03530
DNA-binding protein HU-beta
Organism
rhib Rhizobium sp. AB2/73
Brite
KEGG Orthology (KO) [BR:
rhib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rhib03032
]
I8E17_04800 (hupB)
03036 Chromosome and associated proteins [BR:
rhib03036
]
I8E17_04800 (hupB)
03400 DNA repair and recombination proteins [BR:
rhib03400
]
I8E17_04800 (hupB)
DNA replication proteins [BR:
rhib03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
I8E17_04800 (hupB)
Chromosome and associated proteins [BR:
rhib03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
I8E17_04800 (hupB)
DNA repair and recombination proteins [BR:
rhib03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
I8E17_04800 (hupB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
DUF2267
HU-CCDC81_euk_1
HU-CCDC81_euk_2
DUF6074
Motif
Other DBs
NCBI-ProteinID:
UEQ81844
LinkDB
All DBs
Position
950430..950705
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AA seq
91 aa
AA seq
DB search
MNKNELVSAVAEKAGITKADAASAVDAVFDTVQAELKKGGDIRLAGFGSFTVSHRAATKG
RNPSTGAEVDIPARNVPKFTPGKGLKDSVNS
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagaatgagctcgtgtccgcagtggccgagaaggccggtatcacgaaggctgac
gctgcttccgctgtcgacgctgttttcgatactgtccaggccgaactgaagaagggcggc
gacattcgccttgctggtttcggcagcttcaccgtttctcaccgtgcagccaccaagggc
cgtaacccgtccaccggcgccgaggtcgatattcctgcccgtaacgtaccgaagttcacg
cccggcaagggcctgaaggactcggtcaacagctaa
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