Rhizobium sp. AB2/73: I8E17_05040
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Entry
I8E17_05040 CDS
T10377
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
rhib Rhizobium sp. AB2/73
Pathway
rhib03030
DNA replication
rhib03430
Mismatch repair
rhib03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rhib00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
I8E17_05040 (dnaE)
03430 Mismatch repair
I8E17_05040 (dnaE)
03440 Homologous recombination
I8E17_05040 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rhib03032
]
I8E17_05040 (dnaE)
03400 DNA repair and recombination proteins [BR:
rhib03400
]
I8E17_05040 (dnaE)
Enzymes [BR:
rhib01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
I8E17_05040 (dnaE)
DNA replication proteins [BR:
rhib03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
I8E17_05040 (dnaE)
DNA repair and recombination proteins [BR:
rhib03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
I8E17_05040 (dnaE)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DUF655
Motif
Other DBs
NCBI-ProteinID:
UEQ81887
LinkDB
All DBs
Position
1009100..1012594
Genome browser
AA seq
1164 aa
AA seq
DB search
MADAGGSGAAAPVGEMPEFVHLRVHSAYSLLEGALPLKKILAKAAGDSQPAIAITDTNNL
FVALEFSQKAMDEGLQPIIGCQVSIDMEDGGEGERRGPQQALAKLPSIVLLAATEQGYER
LVDLVSRAYLGGEGNHAVHIAASWLDEIGTEGLIALTGSLTGPVDMALKEGHAPQALSRL
LALKRLFGDRLYVELQRHGTYDRRHEQKMIAMAYEHEIPLVATNEAFFPTRDDYDAHDAL
MAVAHNAIVSDDTRFRLTPDHYLKSRADMAKLFANLPEALENTVEIARRCSFILKTRKPI
LPRFTGATDDAEEAERAEAAELRAQAIEGLDLRLASLGMAPGYAEKDYRERLEFELSVIE
RMKFPGYFLIVADFIKWAKRHDIPVGPGRGSGAGSLVAYALTITDVDPLRFSLLFERFLN
PERVSMPDFDIDFCQDRREEVIRYVQAKYGREQVAQIITFGSLQARAALRDVGRVLEMPY
GQVDKICKLVPNNPANPTPLSKAIEEEPRLQEEADKEPVVARLLDIAQKIEGLYRHASTH
AAGIVIGDRPLSKLVPMYRDPRSDMPVTQFNMKWVEQAGLVKFDFLGLKTLTVLKTAVDF
VAKRGISIDLASIPLDDKPSYEMLSRGETVGVFQVESAGMRKALIGMRPDCIEDIIALVA
LYRPGPMENIPVYNARKHGEEEIESIHPKIDYLLKETQGVIVYQEQVMQVAQVLSGYSLG
EADLLRRAMGKKIKAEMDQQRERFVDGAIKNGVSKGQADVIFDLLAKFANYGFNKSHAAA
YAIVSYQTAYMKAHYPVEFLAASMTLDMSNTEKVNDFRQDAKRLGIEVIAPSVQTSFRHF
ETGDNRIYYALAAIKGVGESAVDHIVEVRGDKPFAGIEDFCLRIDPKQINRRVLESLICA
GAFDCFEIDRAQLIAGLDRIMGYAQVAQENKRSGQHDMFGSAASGPEKIVFPPYTPWLAS
ERLLREFQVLGFYLTAHPLDTYKSVLDKMRVQPFAEFSAAVKQGASNGRLAGTVISKQER
KTRTGNKMGIFVFSDASGQFEAVLFSETLNQYRDVLEVGKSFVITAQADERPEGISLRLQ
TAQSLEEKSLQMQKALRVYVRDSGPLKAVAAHLNAKGDGLVSFIVIKEEGMREVEVALPE
KYRITPEIAAALRTAPGVIDVELV
NT seq
3495 nt
NT seq
+upstream
nt +downstream
nt
atggcggatgcaggtggcagcggcgcggcagcgccggtcggcgaaatgccggaattcgtg
cacctcagggttcattccgcctattctctgctagagggcgcattgccgctcaagaagata
ttggccaaggctgccggggacagtcagccggccattgccatcaccgataccaacaatctg
ttcgttgccctggagttctcgcagaaagcgatggacgaggggctgcagccaatcatcggc
tgtcaggtatcgatcgatatggaagacggcggcgagggcgagaggcgcgggccgcagcag
gctttggcgaagctgccatccatcgtgctgcttgccgccaccgagcagggctacgagcgc
ctcgtcgatctcgtcagccgcgcctatctcggcggcgagggcaaccatgccgttcacatt
gcagcctcatggctggacgagatcggcacggaagggttgatcgcgctcaccggttcgctg
accggcccggttgacatggcgttgaaggaaggccatgcgccgcaggcgctttcccgtctg
ctggccctgaaacgcctgttcggcgacaggttatatgtcgaattgcagcgtcatggcacc
tatgatcgtcgccacgagcagaaaatgatcgcgatggcttacgagcatgagattccgctc
gtcgccaccaacgaagcttttttcccgacgcgggacgattatgatgcgcatgacgctttg
atggcggtggcccacaatgccattgtctcggacgatacgcggttccgcctgacgccggat
cattatctcaagagccgtgccgacatggcgaaactcttcgccaatctgcccgaagcgctg
gagaatacggtcgagatcgcccgccgctgctccttcatcctgaagacccgcaagccgatc
ctgccgcgcttcaccggcgccacggatgatgcggaggaggcggaacgcgccgaggccgcc
gagctgcgcgctcaggcgatcgagggtctcgacctgcgtctcgcctcgctcggcatggcg
ccgggctatgcggaaaaggattatcgcgagcggctggaattcgaactcagcgttatcgag
cgcatgaagtttcccggctacttcttgatcgtcgcggacttcatcaagtgggccaagcgt
cacgatatccctgtcggcccgggccgcggttccggtgcgggttcgttggttgcctatgct
ctgaccatcaccgacgtcgatccgctgcgcttttcgctgctgttcgagcgcttcctcaac
ccggaacgcgtctcgatgccggacttcgatatcgatttctgccaggaccggcgcgaagag
gtgatccgttacgtgcaggccaaatacggccgcgagcaggtggcgcagatcatcaccttc
ggttcgctgcaagcgcgcgcagccttgcgcgacgtcggtcgcgtgctcgaaatgccctat
ggccaggtcgacaagatctgcaagctggtaccgaacaatcccgccaatccgaccccgctc
agcaaggcgatcgaggaggagccgcgcctgcaggaggaggcggacaaggagccggtcgtc
gctcgtctgctcgacatcgcccagaagatcgaaggcctctatcgtcacgcctcgacccat
gccgccggtatcgtcatcggcgaccgtccgctgtcgaagctcgtgccgatgtatcgcgac
ccgcgctccgacatgccggtcacccagttcaacatgaaatgggtggagcaggccggtctg
gtgaagttcgacttcctcggcttgaagacgctgactgtcctcaagacggccgtcgatttc
gttgccaagcgcggcatctctatcgatcttgccagcataccgctcgacgacaaaccgagc
tatgagatgctctcgcgcggcgagacggtcggcgtgttccaggtggaaagtgcgggcatg
cgcaaggcgctgatcggcatgcgtcccgactgcatcgaggatatcatcgcgctcgtagcg
ctctatcgtcccggcccgatggagaacatcccggtctataatgcccgcaagcacggcgag
gaagagatcgaatcgatccacccgaagatcgactatcttcttaaggaaacccagggcgtt
atcgtctatcaggaacaggtgatgcaggtcgcccaggtgctttccggctattcgctcggc
gaagcggatcttctgcgccgcgccatgggtaagaagatcaaggcggagatggaccagcag
cgcgagcgctttgtcgacggagccatcaagaacggcgtttcgaagggtcaggccgacgtc
atcttcgatctgctcgcgaaattcgccaattacggcttcaacaagtcgcatgccgccgcc
tacgccatcgtctcctaccagaccgcctatatgaaggcgcattatccggtggagttcctg
gcagcgtcgatgacgctcgatatgtccaacaccgaaaaggtcaacgacttccgtcaggat
gccaagcggctgggcatcgaggtcatcgcgccctccgtgcagacctcgttccgccatttc
gagacgggtgataaccgcatctattatgctctggcggccatcaagggcgtcggtgaatcc
gccgtcgaccatatcgtcgaggtgcgcggcgacaaaccctttgctggcatcgaagatttc
tgcctgcgcatcgatcccaagcagatcaaccgccgcgttctggaaagcctgatctgcgcc
ggcgctttcgattgcttcgaaatcgaccgcgcccagctgatcgccggcctcgaccgcatc
atgggctatgcccaggtggcgcaggaaaacaagcgcagcggccagcacgacatgttcgga
agtgccgcctccggtccggaaaagatcgtgtttccgccctatacgccatggctcgcctcg
gagcgtttgctgcgcgaattccaggtgctcggtttctatctgacggcacatccgctcgat
acttataagagcgtgctcgacaagatgcgggtgcagccgtttgccgagttctccgccgcc
gtaaagcagggcgccagcaacggccgtctcgccggcacggtgatctccaagcaggagcgc
aagacacgcaccggcaacaagatgggcatcttcgtcttctctgatgcctcgggccagttc
gaagcagtgcttttctcggagacgctcaaccagtatcgtgacgtgctcgaagtcggcaaa
tccttcgtcattaccgcccaggcggatgagcgcccggaaggcatcagcctgcgcctgcag
acggcgcagtcgttggaggagaagtcgttgcagatgcagaaggcactgcgcgtctatgtc
cgcgattccggcccgctgaaagccgttgccgcgcatctgaacgcgaagggcgatggcctg
gtttccttcatcgtcatcaaggaggaaggaatgcgcgaggtcgaggtggcactgccggag
aaatatcgcatcacgcccgaaatcgctgctgccttgcgcacggcacccggcgtgatcgac
gtggagctggtctga
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