Rhizobium sp. AB2/73: I8E17_05700
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Entry
I8E17_05700 CDS
T10377
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
rhib Rhizobium sp. AB2/73
Pathway
rhib03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
rhib00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
I8E17_05700
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rhib03021
]
I8E17_05700
03400 DNA repair and recombination proteins [BR:
rhib03400
]
I8E17_05700
Enzymes [BR:
rhib01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
I8E17_05700
Transcription machinery [BR:
rhib03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
I8E17_05700
DNA repair and recombination proteins [BR:
rhib03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
I8E17_05700
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_XRCC3_RpoA
McdB_C
IDH
Motif
Other DBs
NCBI-ProteinID:
UEQ82007
LinkDB
All DBs
Position
1127818..1128828
Genome browser
AA seq
336 aa
AA seq
DB search
MIQKNWQELIKPNKVEFTSSGRTKATLVAEPLERGFGLTLGNALRRVLLSSLRGAAVTAV
QIDGVLHEFSSIPGVREDVTDIVLNIKEIAIKMDGDDSKRMVVRKQGPGVVTAGDIQTVG
DIEILNPEHVICTLDEGAEIRMEFTVNNGKGYVPAERNRAEDAPIGLIPVDSLYSPVKKV
SYKVENTREGQVLDYDKLSMSIETDGSISGEDAVAFAARILQDQLGVFVNFDEPQKEAEE
EAVTELAFNPALLKKVDELELSVRSANCLKNDNIVYIGDLIQKTEAEMLRTPNFGRKSLN
EIKEVLASMGLHLGMEVPAWPPENIEDLAKRYEDQY
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgattcagaaaaactggcaggaactgatcaagcccaacaaggtcgagttcacctcgagc
ggccgcaccaaggcaacgctcgtggccgaaccgctggagcgtggctttggtctcaccctc
ggcaacgcgctgcgtcgcgttctgctgtcctctctgcgcggtgccgctgtgacggccgtg
cagatcgacggcgtattgcatgagttctcctctatcccgggcgtccgggaagacgtgacg
gacatcgtgctgaacatcaaggaaatcgccatcaagatggacggcgatgacagcaagcgc
atggtcgtccgcaagcagggcccaggcgtcgtaacggctggcgacatccagacggtcggc
gatatcgaaatcctcaaccccgagcatgtcatctgcacgctcgacgagggcgccgaaatc
cgcatggaattcaccgtcaacaacggcaagggctatgtgcccgccgagcgcaatcgtgcg
gaagacgctccgatcggcctcatcccggtcgacagcctctattcgccggtcaagaaggtg
tcctacaaggttgaaaatacccgcgaaggacaggttctcgactacgacaagctgagcatg
tcgatcgaaaccgacggttcgatcagcggtgaagatgccgtcgctttcgcggctcgcatc
ctccaggatcagcttggcgtgttcgtcaacttcgacgagccgcagaaggaagccgaagaa
gaagcagtcaccgaactcgctttcaacccggcgctcctcaagaaggtggacgagctggaa
ctgtccgttcgctcggcaaattgcctgaagaacgacaacatcgtctacatcggcgacctc
attcagaagaccgaagcagaaatgctccgcacgccgaattttggtcgcaagtcgctgaac
gaaatcaaggaagttctcgcttccatgggcctgcacctaggcatggaagtgccggcatgg
ccgcccgagaacatcgaagatctcgccaagcgatacgaagaccaatactaa
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