Rhizobium sp. AB2/73: I8E17_08915
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Entry
I8E17_08915 CDS
T10377
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
rhib Rhizobium sp. AB2/73
Pathway
rhib03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
rhib00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
I8E17_08915 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhib03400
]
I8E17_08915 (uvrB)
DNA repair and recombination proteins [BR:
rhib03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
I8E17_08915 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
I8E17_08915 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
AAA_16
SWI2_SNF2
AAA_22
Kinesin
Microtub_bd
Motif
Other DBs
NCBI-ProteinID:
UEQ82597
LinkDB
All DBs
Position
1784754..1787540
Genome browser
AA seq
928 aa
AA seq
DB search
MAKSSKKYPAATGFEEAPQASFEGAPLSGSVADWVKQLEADAEASSVETQREIASKAGKH
RKKVEITAGKTARGVSMGGSTDPKTRAAAGLNPVSGLDIALEDADKISTSGVTATVEALS
KLIESGNPLHKNGKIWTPHRPARPEKSEGGIEIRMASEYQPAGDQPTAIRDLVEGLQNGD
RNQVLLGVTGSGKTFTMAKVIEATQRPAVILAPNKTLAAQLYSEFKNFFPDNAVEYFVSY
YDYYQPEAYVPRSDTYIEKESSINEQIDRMRHSATRSLLERDDCIIVASVSCIYGIGSVE
TYTAMTFQMNVGDRLDQRQLLADLVAQQYKRRDIDFTRGSFRVRGDTIEIFPAHLEDAAW
RISMFGDEIDAITEFDPLTGQKTGDLKSVKIYANSHYVTPRPTLNGAIKAIKEELKLRLA
ELEKAGRLLEAQRLEQRTRYDVEMLEATGSCQGIENYSRYLTGRNPGEPPPTLFEYIPDN
AIIFIDESHVTVPQIGGMYRGDFRRKATLAEYGFRLPSCMDNRPLRFEEWDAMRPDTIAV
SATPGGWEMEQSGGVFAEQVIRPTGLIDPPVEVRSARTQVDDVLGEIRETAAKGYRTLCT
VLTKRMAEDLTEYLHEQGVRVRYMHSDIDTLERIEIIRDLRLGAFDVLVGINLLREGLDI
PECGFVAILDADKEGFLRSETSLIQTIGRAARNVDGKVILYADTITGSMQRAMDETNRRR
EKQMAYNKEHGITPESVKAKISDILDSVYEKDHVRADIGGASGKGFADGGHLVGNNLQAH
LNALEKSMRDAAADLDFEKAARLRDEIKRLKAVELAAMDDPLAREEAKSLESRGSATGKR
APPAPDSRSYFAKPSLDEMGPGGDAGTPLFRKNTLDEMTVGRTEKPVTGKLPDKPITRAK
PGVGSYEDPVDEKQRKGRTKGKTGRPGR
NT seq
2787 nt
NT seq
+upstream
nt +downstream
nt
atggccaaatcatcgaaaaaataccccgccgcgaccggtttcgaagaggcgccgcaggca
tcgttcgaaggcgcgccgctcagcggcagtgtcgccgactgggtgaaacagctcgaagcc
gatgcggaagcatccagcgtcgaaacccagcgcgagattgcctcgaaagccggcaagcac
cgcaagaaggtggaaatcaccgccggcaagaccgcgcgcggcgtctccatgggtgggtcg
accgaccccaaaacacgcgccgccgccggcctcaatccggtctccggcctcgatatcgcg
cttgaagatgccgacaagatttcgacgagcggcgtaacggcgactgtagaagccctgtca
aagctgatcgagagcggcaacccgctgcataagaacggcaagatctggacgccgcaccgt
cctgcccgcccggaaaaatccgaaggcggcatcgagatccgcatggcctcggaatatcag
ccggctggcgaccagccgacggcgatccgcgatctcgtcgaagggctgcaaaacggtgac
cgcaaccaggtgctgctcggcgtcaccggctccggcaagaccttcaccatggccaaggtg
atcgaggcgacgcagcgcccggccgtcatcctcgcgccgaacaagacgctggcggcccag
ctctattccgaattcaagaacttcttcccggacaacgcggtcgagtatttcgtctcctac
tacgattactaccagccggaagcctatgtgccgcgctcggacacctatatcgagaaggag
agctcgatcaacgagcagatcgaccgcatgcgccactcggcgacgcgttcactgctggaa
cgtgacgactgtatcatcgtcgcctcggtctcgtgcatctacggtatcggctcggtcgag
acctatacggccatgaccttccagatgaatgtcggcgaccggctcgatcagcggcagctg
ctggccgacctcgtggcgcagcaatacaagcgccgcgacatcgatttcacgcgcggctcc
ttccgcgttcgcggcgacacgatcgaaatctttccggcccacctggaggatgctgcctgg
cgcatttccatgttcggcgacgagatcgacgccatcaccgaatttgaccccctcaccggc
cagaagaccggtgacctgaaatcggtgaagatctacgccaattcgcactatgtaacaccg
cgcccgacgctgaacggcgccatcaaggcgatcaaggaagagctgaaactgcgccttgcg
gagctggaaaaggccggccgcctgctggaagcgcagcgtctggagcagcgcacccgttat
gacgtcgaaatgcttgaggccaccggctcctgccagggcatcgagaactattcgcgctat
ctgaccggtcgcaatcccggcgagccgccgccgacgctgttcgaatacattcccgataac
gccatcatcttcatcgatgaaagccacgtcaccgtgcctcagatcggcggcatgtacaga
ggcgacttccgccgcaaggcgacgcttgccgaatacggcttccgcctgccctcctgcatg
gacaaccgtccgctgcgtttcgaggagtgggacgccatgcgcccggacacgatcgcggtg
tcggcaacacccggcggctgggagatggagcaatccggcggtgtcttcgccgaacaggtc
atccgcccgaccggcctcatcgatcctccggtggaggtccgttcggcccgcacgcaggtt
gacgacgtgcttggcgaaatccgcgaaaccgccgccaagggctatcgcacgctttgcact
gtgctgaccaagcgcatggcggaggacctgacggaatatctgcacgaacaaggcgtgcgc
gtgcgctacatgcactccgacatcgacacgttggaacgcatcgagatcatccgcgatctt
cgcctcggcgccttcgacgtgctcgtcggcatcaacctgctgcgcgagggtctcgacatt
cccgaatgcggcttcgtcgccattctcgatgccgacaaggaaggcttcctgcgctcggag
acatcgttgatccagacgatcggccgcgccgcgcgtaatgtcgacggcaaggtcatcctt
tacgccgataccattaccggctcgatgcagcgggcgatggacgagaccaatcgccgccgc
gaaaagcagatggcctacaacaaggaacacggcatcacgccggaatcggtcaaggcgaag
atttccgacatcctcgacagcgtctacgagaaggaccatgtccgcgccgatatcggcggc
gcctccggcaagggctttgccgatggcggccatctcgtcggcaacaatctgcaggcccat
ctcaacgcgctggaaaaatccatgcgcgatgctgccgccgacctggacttcgaaaaggcc
gcaaggctgcgcgacgagatcaagcgcctcaaggccgtcgagctcgccgccatggacgat
ccgctcgcccgcgaggaggcaaagagcctcgaaagccgcggttccgcaacgggcaagcgt
gcgccgccggcgccggattcccgatcctatttcgccaagcccagccttgacgaaatgggt
ccgggcggcgatgccggcacgccgctcttccgtaagaatacgctggatgagatgaccgtc
ggccgcaccgaaaagcctgtcaccggcaagctaccggacaagccgatcacccgggcaaag
ccgggcgtcggctcctatgaggacccggtggacgagaagcagcgcaaggggcggacaaaa
ggcaagacggggcggcccggccgataa
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