Rhizobium sp. AB2/73: I8E17_09650
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Entry
I8E17_09650 CDS
T10377
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
rhib Rhizobium sp. AB2/73
Pathway
rhib03420
Nucleotide excision repair
rhib03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rhib00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
I8E17_09650
03430 Mismatch repair
I8E17_09650
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhib03400
]
I8E17_09650
Enzymes [BR:
rhib01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
I8E17_09650
DNA repair and recombination proteins [BR:
rhib03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
I8E17_09650
MMR (mismatch excision repair)
Other MMR factors
I8E17_09650
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
UvrD_C_2
Viral_helicase1
PcrA_UvrD_tudor
AAA_11
Motif
Other DBs
NCBI-ProteinID:
UEQ82735
LinkDB
All DBs
Position
1938972..1941437
Genome browser
AA seq
821 aa
AA seq
DB search
MTIGHDDIPFFDEEPEHVAPRRSAPTAGSNGGGIAARAMAARDSGRRPDYLSGLNAEQAE
AVETLDGPVLVLAGAGTGKTRVLTTRIAHILSTNRAFPSQILAVTFTNKAAREMKERIAL
LVGGAVEGMPWLGTFHSIGVKLLRRHAELVGLTSSFTILDTDDVVRLIKQLIQAEGLDDK
RWPAKQFAGMIDTWKNKGLSPADIPEGDARAFANGKGRELYAAYQNRLKTLNACDFGDLL
LHPINMFRQNPDILKDYHQRFRYILVDEYQDTNTAQYMWLRLLAQRQKGEPQNVCCVGDD
DQSIYGWRGAEVDNILRFEKDFPGAKVIKLERNYRSTEHILGAAAHLIAHNEGRLGKTLF
TDRSEPDDIKVQVHASWDSEEEARAIGEEIEQLQRNKHNLNDIAILVRASFQMREFEDRF
VTLGLNYRVVGGPRFYERLEIRDAMAYFRLVCQPADDLAFERIINTPKRGLGDTTVRALH
DYARVRDIPMLAAAADIIETDEMKPKARKALFDVVQSFRRWQGLLENTPHTELAEQILEE
SGYTDMWKNDKSAEAPGRLENLKELIRSMDSFESMRGFLEHVALVMDAEQNENLDAVSIM
TLHSAKGLEFDTVFLPGWEEGLFPHQRSLDESGRAGLEEERRLAYVGITRAKRRCHIWFV
SNRRIHGLWQSTIPSRFLDELPETHVQVAEVEQSYGGYGRGGYGQSRFDKADPFANTYST
PGWKRAQANRNDATRDNWGSRSGHAVERIGYGESGPKVRTIDGELVAKSTSAEPSKFAIG
DRVFHIKFGNGNVSEIEGNKLTIEFDRAGQKRVLDGFVERV
NT seq
2466 nt
NT seq
+upstream
nt +downstream
nt
atgaccattggacatgacgatattcccttctttgacgaggagccggagcacgtggcaccg
cgccgttccgcgccgacagccggcagcaacggcggcggcattgcggcccgcgccatggcg
gcacgcgacagcggccgccggcccgattatctctcgggcctcaatgccgaacaggcggaa
gccgtggaaacgctcgacggccccgtgctggtgcttgcgggcgccggcaccggcaagaca
cgcgtgctgacgacacgcatcgctcatatcctctccacaaaccgcgccttccctagccag
atcctcgccgtcaccttcaccaacaaggcggctcgcgagatgaaggaacgtattgcgctg
ctggtcggcggcgcggtcgaaggcatgccctggctcgggaccttccactcgatcggtgtg
aagctgttgcgtcgtcatgcggaactggtcggtctaacctccagcttcaccattctcgac
accgacgatgtcgtccggctgatcaagcaactgatccaggccgaagggctcgacgacaag
cgctggccggccaagcagtttgccggcatgatcgacacatggaagaacaagggcctgagc
cccgccgatattccggaaggtgacgcccgcgcctttgccaacggcaagggccgcgaactc
tatgcggcctaccagaaccgcctgaagacactgaacgcctgcgacttcggcgaccttttg
ctgcatccgatcaatatgttccggcagaatcctgatatcctcaaggattatcaccagcgc
ttccgctacatcttggtcgatgagtatcaggacaccaacacggcgcaatatatgtggctg
cgcctgctggcgcagcggcagaaaggcgagccgcagaatgtctgctgcgtcggcgacgac
gaccagtcgatctatggctggcgcggcgcggaggtcgacaatatcctgcgcttcgagaag
gattttccaggcgccaaggtcatcaagctcgagcgcaactatcgctccacagagcatatt
ctcggtgccgccgcgcatctgatcgcccataatgaaggccggctcggcaagacgctgttc
accgaccgctccgaaccggacgacatcaaggtgcaggtgcacgcctcctgggattccgag
gaggaagcgcgcgccatcggcgaagagatcgagcagctccagcgcaacaaacacaatctc
aacgatatcgccatcctcgtgcgcgcctccttccagatgcgcgagttcgaagaccgtttc
gtgacgctcggcctgaactatcgcgtcgtcggcggcccgcgcttctacgagcgcctcgaa
atccgcgacgccatggcctatttccgcctcgtctgccaaccggccgacgacctcgccttc
gagcgcatcatcaatacaccgaagcgcggcctcggcgacaccacggttcgcgccctgcat
gattacgcccgcgtgcgcgatatcccgatgctggcggcagcggccgatatcatcgagacg
gatgagatgaagccgaaggcacgtaaggcgctgttcgacgtcgtgcaatcattccgccgc
tggcagggcctgctcgagaatacgccgcataccgagcttgccgagcagatcctcgaagag
tccggctatacggacatgtggaagaacgacaaatcggcggaagcgccggggcggcttgaa
aacctcaaggaactcatccgttccatggacagctttgaatccatgcgcggcttccttgaa
cacgtcgcccttgttatggatgccgagcagaacgaaaatctcgacgccgtctccatcatg
acgctgcactctgccaagggtctggaattcgacacggtgttcctgcccggctgggaggaa
ggcctgtttccgcatcagcgctcgctcgacgaaagcggtcgcgccggtctcgaggaagag
cgtcgcctcgcctatgtcggcatcacccgcgccaagcgccgctgccacatctggttcgtc
tccaaccgccgcattcacggcctctggcaatcgacgatcccctcccgctttctcgacgaa
ctgccggaaacgcatgttcaggtcgccgaagtcgagcaatcctatggcggatacggtcgc
ggcggatacggccagtcccgcttcgacaaggccgatcccttcgccaacacctattccacg
cccggctggaaacgcgcccaggccaaccgcaacgatgcgacccgcgacaactggggcagc
cgctccggccacgccgtcgagcgcatcggctacggcgagagcggcccgaaggtgcgcacc
atagacggcgagctggtggccaaatccacttccgccgaaccctccaaattcgccatcggc
gaccgcgtcttccacatcaaattcggcaacggcaatgtctctgagatcgagggcaacaag
ctgacgatcgaattcgaccgcgcggggcagaaaagggttttggatgggtttgtcgagcgg
gtttga
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