Rhizobium sp. AB2/73: I8E17_10340
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Entry
I8E17_10340 CDS
T10377
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
rhib Rhizobium sp. AB2/73
Pathway
rhib03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rhib00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
I8E17_10340 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rhib03019
]
I8E17_10340 (recQ)
03400 DNA repair and recombination proteins [BR:
rhib03400
]
I8E17_10340 (recQ)
Enzymes [BR:
rhib01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
I8E17_10340 (recQ)
Messenger RNA biogenesis [BR:
rhib03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
I8E17_10340 (recQ)
DNA repair and recombination proteins [BR:
rhib03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
I8E17_10340 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
AAA_30
Motif
Other DBs
NCBI-ProteinID:
UEQ79260
LinkDB
All DBs
Position
complement(2081601..2083481)
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AA seq
626 aa
AA seq
DB search
MPQPERQEPRFSADDALFAEHTGAPAPLDVLKRVYGYSAFRGKQQQVVEHVVSGGDAVVL
FPTGAGKSLCFQIPALCRDGIGIVVSPLIALMRDQVEAMKQLGIRAAALNSSLSREEASD
VYRAISAGKLDLLYVTPERIVTEGFCQMLGRAKIALFAIDEAHCVSQWGHDFRPEYRDLG
RLAELFPGVPRIALTATADPHTRDDIIERLALDNAKVFTTSFDRPNITYEIVERDQPRQQ
LLRFLEGHRGDSGIVYCLSRAKVEDTAEWLNGQGIRALPYHAGMDRALRDANQDAFLKEE
DLCLVATVAFGMGIDKPNVRYVAHLDLPGSVEAYYQETGRAGRDGLPSNVWMAYGMADVI
QRRRMIDEGGASEEIKRVERAKLNALLAICETAGCRRQSILAHFGEAHGGGCGNCDTCLK
PVETWDGTEAAIKALAAVYRTGERFGTGHVIDVLMGTVNEKTERFGHVDMPVFGAGKDIP
ARTWQSIFRQLLANGFISIDHTAFGAMKLEEQARAVFKRERQIFFRKDRAETGRRGKKAG
RPEKQAHGLTGEDQLLFDALRAERTRIAKELGVPPYVVFPDTTLIAFATERPKNHKALLG
ISGVGQSKLERYGDAFLAVISDFIGR
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atgcctcagcctgaaagacaagagccgcgattttccgcggacgacgcattgttcgccgag
cacaccggtgcgccggcgccgctcgatgtcctgaagcgcgtttatggctattccgccttt
cgcggcaagcagcagcaagtggtcgagcatgtcgtttccggcggcgatgcggtcgtgctg
tttccgaccggtgccggcaagtcgctgtgcttccagattcccgcgctctgccgcgatggt
atcggcatcgtcgtctcgccgctgattgcgctgatgcgggatcaggtggaggcgatgaag
cagctcggcattcgggcggccgccttgaattcgtcgctgtcgcgcgaggaggccagcgat
gtctatcgcgccatttccgccggcaagctcgatctgctttatgtgacgccggaacgcatc
gtgacggaaggcttctgccagatgctcggcagagcgaagattgcgcttttcgccatcgac
gaggcgcattgcgtctcgcaatggggccatgatttcaggccggaatatcgcgatctcggc
aggcttgcagaactctttcccggcgtcccgcgcatcgccctgacggcaacggccgatccc
catacccgcgacgacattatcgagcggctggctctcgacaatgccaaggttttcaccacc
agcttcgatcgtccgaatatcacttacgagattgtcgaacgcgaccagccgcgacagcaa
ttgctgcgttttctagagggtcatcgtggcgatagcggtatcgtctattgcctctcccgc
gccaaggtcgaggatacggcagaatggctcaatgggcagggcattcgcgcacttccctat
catgccggcatggatcgagcgcttcgcgatgccaatcaggacgccttcttgaaagaggaa
gacctgtgcctcgtggcgacggttgccttcggcatgggtatcgacaagccgaatgtgcgc
tatgtcgcccatctcgatctgccgggatcggtggaggcctattaccaggagacgggccgc
gccgggcgcgatgggctgccctcgaatgtctggatggcctatggcatggccgacgtcatc
cagcgtcggcggatgatcgatgaaggcggggcatccgaggagatcaagcgtgtcgagcgg
gcaaagctcaatgcgctgctcgccatttgtgaaacggccggatgccggcggcagtcgatc
ctcgcgcatttcggcgaggcgcacggcggcggctgcggcaattgcgatacctgcctcaag
cctgtcgagacttgggatgggacggaagcggcgatcaaggcgctcgccgccgtctatcgc
accggcgagcggttcggcaccggccatgtcatcgatgtgctgatgggcaccgtcaacgag
aagaccgagcgcttcggccatgtcgacatgccggttttcggcgcgggaaaggatattccc
gcccgcacctggcaatcgatcttccggcaattgctggcgaacgggttcatcagcatcgac
cacacggctttcggtgccatgaagctcgaggagcaggcaagggctgtcttcaagcgagaa
cggcagatcttcttccgcaaggatcgggccgaaacgggccgtcgcggcaagaaggcggga
cgaccggagaagcaggctcacggtcttaccggcgaagaccagcttctcttcgatgcgctg
cgggccgagcgcacgcggatcgccaaggaactgggcgtgccgccctatgtcgtcttcccc
gacacgacccttatcgcctttgcgacggagcgaccgaaaaatcataaggcgcttctgggg
atttccggtgtcggtcagtcaaaactcgaacgctacggcgatgcgttccttgctgtcatc
tcggatttcatcggtcgttga
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