Rhizobium sp. AB2/73: I8E17_17100
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Entry
I8E17_17100 CDS
T10377
Symbol
addA
Name
(GenBank) double-strand break repair helicase AddA
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
rhib Rhizobium sp. AB2/73
Brite
KEGG Orthology (KO) [BR:
rhib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhib03400
]
I8E17_17100 (addA)
Enzymes [BR:
rhib01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
I8E17_17100 (addA)
DNA repair and recombination proteins [BR:
rhib03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
I8E17_17100 (addA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PDDEXK_1
AAA_19
UvrD_C_2
AAA_30
NPHP3_N
DEAD
Exo5
Motif
Other DBs
NCBI-ProteinID:
UEQ80504
LinkDB
All DBs
Position
complement(3487636..3491202)
Genome browser
AA seq
1188 aa
AA seq
DB search
MSDFPDDDIAILPESDDPGVWISWTTIQQSIASDPERSAWVSANAGSGKTHVLTQRVIRL
LLSGARPSAILCLTYTKAAASEMSNRVFDRLAAWATMPDDELKTRIADIEGKEPDIFKLA
EARRLFAKALETPGGLKIQTIHAFCEALLHQFPLEANVAGHFSVLDDRAAEVLLDDARRA
LLTATTPHGDAELARAFDYVLDLGDESGLETLLGDIIANRNAIRRFTETAERNGGVETAL
LARLGLSPGETETSIAEQYWPLPGLSGDTLELYLTLADQKGGAKAQEVAYALRLAKREAD
PLARAEILEKAMLTAKGEPKSDSQFFVKAMLADAPALADAVAAARAHVVASRDRLKLMRM
YRATHAALILADRLNRDYEELKKRRSQLDFEDLITRTADLLTKKDVGPWIHYKLDQGIDH
ILVDEAQDTSPIQWSVIQSLAEDFFSGDSARPTLRTIFAVGDEKQSIYSFQGARPERFSE
ESDRTRRRVATSGQQFSSIRLPLSFRSTADVLGAVDHVFTSPENARGLSAVNEPVVHRSS
RIGHPGAVDLWEMIAPEPAAKEEDWTAPFDSTPESAPAAILARRMAHTIGNLIGRETIID
KGKARFIEAGDILVLVRKRDSFVNALTRALKRRGNIPVAGADRLVLTSHIAIQDLLALGR
FLLLPEDDLSLCALLKSPLFDLSEEDVFAVAAYRDDEEGVWSHLQRFAAEGHDRFRQVVE
RLRTFLALSKSLPVHDFYARVLGSFGGRRKFLARLGTEVSDILDEFLTFTLDHETSGLPG
LQSFISTLELEAPTVKREQDKGRNEVRIMTVHASKGLEAPIVFLVDGGGKAFTHTHLPKM
RLIETGKDEIPLPVWIPVSALANSLTQADTARLQALAEEEYRRLLYVGMTRAADRLIICG
YRGIRENADTWHAMISAALPGQELYCTQKTFTGPDGDWQGLSWRVAQVQLEFETAREHEK
RSERVGLPAGLSRPLPPQKSLPRPLSPSGVGTVVDEEADDLLVTSALFGGKTKSDRALQK
GRFIHRMLQTLPEIAPEERADAARRYAERAARFWPQAEREALVGSVMALLSHPDLQGTYS
THAQAEVSIMGTLKLGSQSYAVSGRIDRLADLDDRVIILDYKTNRVPPGEESSIPFAHKA
QLAIYREILSPLYPGKRIDCMLVYTENASIYTLSDGVLALALAELETK
NT seq
3567 nt
NT seq
+upstream
nt +downstream
nt
atgagtgattttcccgatgacgatatcgccatcctgcccgaaagcgacgatcccggcgtc
tggatcagctggacgacgatccagcaatcgatcgcctccgatcccgaacgctcggcctgg
gtttcggccaatgccggctccggcaagacgcatgtgctgacgcaacgcgtcatccgcctg
cttctttccggcgcccgcccctcggcgatcctctgcctgacctataccaaggctgctgcc
tccgaaatgtcgaaccgcgtcttcgaccggctcgctgcctgggcaaccatgccggacgac
gagctgaagacgcgtattgccgatatcgagggcaaggagcctgacatcttcaagctcgcc
gaggcgcggcggctgtttgccaaggcgctggaaacgccgggtgggctgaagatccagacc
atccacgccttttgcgaggccttgctgcatcaattcccgctcgaggccaatgtcgccggc
catttctccgttctcgacgatcgcgccgctgaagtgctgctcgacgatgcccgccgcgcg
ctgctgacggcaacgacaccgcatggcgatgccgaactggcgcgagcgttcgactatgta
ctcgatctcggcgacgagtctgggctcgagaccctgctcggcgatatcattgccaatcgc
aatgcgatccgccgctttaccgagacggccgaacgcaacgggggtgtcgaaactgcgttg
cttgctcggcttggcctttcgcccggtgagacggaaacgagcattgcggagcaatattgg
ccgctgcccggcctgtccggcgacacgctggagctttatctcacgctcgccgaccagaag
ggcggcgccaaggctcaggaagtggcttatgcgctgcgtcttgccaaacgcgaggcagat
ccgctcgcccgcgccgagatcctcgaaaaggccatgctgaccgccaagggcgaaccgaaa
tcggatagccagttcttcgtcaaggccatgcttgctgatgcacctgcgctcgctgatgcc
gtggctgcggcacgcgcgcatgtggttgccagccgcgaccggctgaagctgatgcggatg
tatcgggccacccatgccgcgctcattctcgccgatcgtctgaaccgcgactatgaggaa
ctgaaaaaacggcgcagccagctcgatttcgaagacctcatcacccgcacggccgatctt
ctgaccaagaaggacgtcgggccatggattcattacaagctggatcagggcatcgaccat
attctggtggacgaggcgcaggatacgagcccgatccagtggagcgtcatccagtcgctg
gcggaggatttcttctccggtgacagcgcccggccgacgctgcgcacgatctttgccgtc
ggcgacgagaagcaatcgatctattcgttccagggtgcacgtcctgaacggttctccgag
gaaagcgaccgcacaagacggcgcgtggcgacgagcggccagcaattctcatcgatccgc
ctgccgttgtccttccgctcgacggccgatgtgctcggcgccgtcgatcatgtcttcacc
agtccggagaatgcccgcggcctcagcgccgtcaacgagcctgtcgtgcatcgttccagt
cgcatcggccaccccggcgccgtcgatctctgggaaatgattgcgccggagccggccgcc
aaggaagaagactggacggcgcctttcgattcgacgccggaaagcgcacctgctgccatc
ctggcacggcggatggcgcatacgatcggcaatcttatcgggcgggaaacgatcatcgat
aaaggcaaggcccgtttcatcgaggctggcgacattctcgtgctggtgcgcaagcgcgac
agcttcgtcaacgcgctgacccgagcgctgaagcggcgcggcaacattcccgtcgccggc
gccgatcgtctggtgctgacgagccatatcgccattcaggatcttctggcgctcggccgc
ttcctgttgctgccggaggacgatctctcgctctgtgcgctgctgaagagccccttgttc
gacctcagcgaagaggatgtctttgcggtggccgcctatcgcgatgacgaggagggcgtc
tggagccacctgcagagatttgccgccgaaggccatgaccgcttcaggcaggtggtcgaa
cggctgagaacctttcttgccctgtccaagagcctgcccgtacacgatttctatgcccgc
gtgcttggcagcttcggcggcaggcggaaatttctggcgcggctcggcaccgaagtcagc
gacattctcgacgaattcctgaccttcacgctcgatcacgagacgagcggcctgcccggc
ctgcaatcctttatctcgacgctggaactggaagcgccgacggtcaagcgcgagcaggac
aagggccgcaacgaagtgcggatcatgacggtgcatgcctcgaaggggctggaggcaccc
atcgtgtttctcgtcgatggtggcggcaaggcctttacccatacgcatctgccgaagatg
cggctgatcgaaactggcaaggacgaaatcccgctgccggtctggattccagtctcggcg
ctcgccaattcgctgacgcaggccgatacggcgcggctgcaggcgctggcggaagaggaa
tatcgccggttgctctatgtcggcatgacgcgcgccgccgaccgccttatcatttgcggc
taccgcggcatccgcgagaatgccgatacctggcatgcgatgatttccgcggcgctgccc
gggcaagaactgtactgcacgcagaagaccttcaccggcccggatggcgactggcagggc
ttgagctggcgggttgcccaggtccagctcgaattcgagaccgcaagagagcacgagaag
cgttcggagcgcgtcggcctgccggcgggtctcagccggccattgccgccgcaaaaaagc
ctgccgcggccgctcagcccctccggcgtcggcaccgtcgtcgatgaggaagccgacgat
ctcttggtgacttcggcgcttttcggcgggaaaaccaaatccgaccgcgccctgcagaaa
ggccgcttcattcaccgcatgctgcagaccttgcccgaaatcgcgcccgaggagcgcgcc
gatgccgcccgacgctacgctgaacgggccgcgcgcttctggccgcaggccgaacgggag
gcgctggtcggctcggtcatggcgctgctctcccatcctgatctgcaaggcacctacagc
acgcatgctcaggcggaagtctcgatcatgggcacgctgaagctcggcagccagtcctat
gccgtctccggccgcatcgaccggctggctgacctggacgatcgcgttatcattctcgac
tataagacgaatcgcgtgccgcctggcgaggaaagcagcatccccttcgcacataaggcg
cagcttgccatctatcgcgagatcctttcgccgctctatccgggaaagcgcatcgactgc
atgctggtctataccgaaaatgcctcgatctataccttgtcggacggggtgcttgcattg
gcgcttgcggagctcgagacaaagtga
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integrated database retrieval system
