Rhizobium sp. AB2/73: I8E17_17255
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Entry
I8E17_17255 CDS
T10377
Symbol
hrpB
Name
(GenBank) ATP-dependent helicase HrpB
KO
K03579
ATP-dependent RNA helicase HrpB [EC:
5.6.2.6
]
Organism
rhib Rhizobium sp. AB2/73
Brite
KEGG Orthology (KO) [BR:
rhib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rhib03019
]
I8E17_17255 (hrpB)
Enzymes [BR:
rhib01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
I8E17_17255 (hrpB)
Messenger RNA biogenesis [BR:
rhib03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
I8E17_17255 (hrpB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HrpB_C
Helicase_C
DEAD
CON_HrpB
ResIII
AAA_30
HA2_N
Flavi_DEAD
AAA_19
Cas3-like_C_2
AAA_22
Motif
Other DBs
NCBI-ProteinID:
UEQ80532
LinkDB
All DBs
Position
complement(3525918..3528395)
Genome browser
AA seq
825 aa
AA seq
DB search
MTYRVPSLPELPVSHVLADIGAALAEERRAVLSAPPGAGKTTLVPLYLLDEAWRGDDRII
LLEPRRLAARAAAARMASLLGEQVGDTVGYRMRLDNRISSKTRIEVVTEGVFARMILDDP
ELSGISTVIFDEFHERSLDADFGLALALDVQAALREDLRILVMSATLDVERVAALLDHPP
MIESMGRSFPIDIRHQDRPAGERIEDTVTRAILDAHAREQGSILAFLPGQAEITRTVERL
EGRFRPETMIAPLYGNLSQKEQDAAIRPAPQGTRKIVLATSIAETSITIDGVRIIIDSGL
QRLPVFEASTGITRLETVRVSRASADQRAGRAGRTEPGIAIRLWHPGQTAALPAFTPPQI
LSSDLSGLALDLAHWGVQDPATLAFVDQPPATTLAEARALLRQLGALDAENGLTARGRLM
RELALPPRLAAMVISAGEFGQAREAALLAVLLTEQGLGGQSIDVEDRLRRFKTEKGERAE
AARRLAGRLAQAAGGNGGTPSSIPPLAGALLLHAFPDRIALQRGGRGRFVMANGRGAELP
ETERLAGSQMLVVADLTGRAAQARVLAAAEISRADVEEHLPGEIRTEDQSFFDRASRQVR
ARRMTRLGAIIFEETPLPRPTGEPAAKALADGIRELGIGVLPFSKEATQLRDRIGFLHRT
IGDPWPDMSDEALLARLEEWFMPFQPDARGLSDISAGSLSNGLMSLVPHELQRDLARMAP
THFEAPTGHRHPIQYDGEEPLLTIRVQELFGLKQHPAIGGGRLPLVLELTSPAYRPIQTT
RDLPGFWAGSWKDVRADMRGRYPRHPWPEDPAEALPTTRAKPRGT
NT seq
2478 nt
NT seq
+upstream
nt +downstream
nt
gtgacatatagagtaccttcattgccggagctgcctgtctcgcatgtgctcgccgatatc
ggtgcggcactcgctgaagagcggcgtgccgtgctctccgcgccgcccggcgccggcaag
acgacgctggtaccgctttatctcttggacgaagcctggcgcggcgatgacaggatcatt
cttctggagccgcggcggctggccgcaagagccgctgctgcccgcatggcctcactgctc
ggcgaacaggtgggcgatacagtcggctaccgcatgcggctcgacaaccgcatttcttct
aagacgcgcattgaggtggtgacggaaggtgtgttcgcgcggatgatcctcgacgacccc
gaactctcaggcatctccaccgtcatcttcgacgaattccacgagcgctcgctggatgcg
gatttcggcctggcgctggcgctcgatgtgcaagcggcgctgcgagaggatctgcgcatt
ctcgtcatgtcggcaacgctcgatgtggagcgtgtcgctgcactcctcgaccacccgccc
atgatcgaaagcatgggtcgcagcttcccgatcgatatccgtcatcaggatcggccagcg
ggagagcggatcgaggatacggtgacgcgggcgatacttgatgcgcacgcgcgcgaacag
ggctccatcctcgccttcctgcccgggcaggcggaaatcacccgcacggtggagcggctg
gagggccgcttccggccggagacgatgattgcgccgctctacggcaatctcagccagaag
gaacaggatgcggcaattcggccagcgccgcagggcacgcgcaagatcgtgctggcgacc
tcgatcgccgaaacttccatcaccatcgatggcgtgcgaatcattatcgacagcggattg
cagcgcctgcccgttttcgaggcttccactggcatcacgcggctcgagacggtgcgcgtg
tcgcgcgcctcggccgatcagcgcgccggccgcgccggacgaaccgaaccgggcatcgcc
atccggctctggcatccggggcagaccgcggcgcttccggcgttcacgccgccgcagatc
ctttcgagcgatctttccggcctggcactcgatttggcccattggggcgtgcaagatcct
gcgacgcttgccttcgtcgatcaaccgcctgcgaccacgcttgccgaagcacgagccctg
ctgagacagctgggtgcgctcgacgcggaaaacgggctgacggcgcgcggacggctgatg
cgcgagctcgccctgccgccacgactggcggcgatggtgatttcggctggcgaattcggc
caggcgcgcgaggcggcgctgcttgccgtactgctgacggaacaggggcttggtgggcag
agcatcgacgtggaagaccggctgcggcgcttcaagaccgagaagggtgaacgggccgag
gccgcgcgtcgtcttgccgggcgtctcgctcaagcggccggtggcaacggcggcacccct
tcctctattcctccgcttgccggcgcgctgctgctgcatgcctttcccgaccgcatcgcg
ctgcagcgtggcgggcggggacgtttcgtcatggccaatgggcgcggcgcagagttgccg
gagaccgagcggcttgccggctcccagatgcttgtcgtcgcggacctgacgggacgtgcg
gcgcaggcgcgcgttcttgctgcggcggagatttcccgcgccgatgtcgaagagcatttg
ccgggcgaaattcgcaccgaagaccagagctttttcgacagagcgagccggcaggtgcgg
gcgcggcggatgacaaggctcggtgccatcatcttcgaagagacgcctctgccgcggccc
accggcgagccggcggccaaggcgctggcggacggcatacgggagctcgggatcggtgtc
ctgccgttctccaaggaagccacgcagctgcgggacaggatcggcttcctgcatcggacg
atcggcgatccgtggcccgatatgagcgacgaggcgctgcttgctcggcttgaggaatgg
ttcatgccgtttcagcccgacgcgcgcggcctctccgatatctccgcgggcagcctttcc
aacgggttgatgtctctcgtgccgcacgagctgcagcgcgacctcgctcgaatggcaccg
acgcatttcgaggcgccgaccggccaccgccatcccattcaatatgatggcgaggaacca
ctgttgaccattcgggtgcaggagctgttcgggctaaagcagcatccggccatcggcggc
ggcagattgccgctggtgctggaattgacatcgccggcatatcgcccgatccagacgacg
cgcgacctgccgggcttctgggccggatcctggaaggatgtgcgcgccgatatgcgcggc
cgctaccccaggcacccctggccggaagatccggccgaggccttgccgacgacacgcgcc
aagccaagggggacatga
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