Rhizobium sp. AB2/73: I8E17_23865
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Entry
I8E17_23865 CDS
T10377
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
rhib Rhizobium sp. AB2/73
Pathway
rhib03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
rhib00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
I8E17_23865
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhib03400
]
I8E17_23865
DNA repair and recombination proteins [BR:
rhib03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
I8E17_23865
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ku
WASH-7_mid
Motif
Other DBs
NCBI-ProteinID:
UEQ84200
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All DBs
Position
pAtAB2-73f:937254..938147
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AA seq
297 aa
AA seq
DB search
MPMSPRAQWKGYLKFGEVSCPVSLYTAVSTSERISFHTLNRATGNRVRREFIDSASEKPV
PREDQVKGYELNKDDYIILEPEEVAAAVPESDKVLHVQAFLACDDIDDVYFDRPYYLAPS
APASAEAFALIREGMRKKQVAAIARTVLFRRLRTMMIRAHGAGLIATTLNFDYEVRSAQE
AFEDVPDMKIKGEMLDLARHIIATKKGSFDASEFDDRYEAALAELVKAKIEGKKIPQRKP
AKVAKVTDLMEALRQSAGMAGQGKTGVKHSAKKSRAASGKAAKSRAASSSRTQRKAS
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atccccatgagcccgcgcgcgcaatggaaaggatatctcaaattcggggaggtcagctgc
ccggtctcgctctatacggcagtttccacttcggaacggatttcctttcacacgctgaac
cgggcaaccggcaaccgggtcaggcgcgaattcatcgacagcgcgagcgaaaagcctgtg
ccgcgcgaggatcaggtcaagggttacgaactcaacaaggacgattacatcatcctcgag
cccgaggaagtcgccgcggcggtgccggaaagcgataaggtcctgcacgtacaagccttt
ctggcatgcgacgacattgatgatgtctatttcgaccggccctattatctggccccttcc
gctccggcgagcgcagaagcgttcgcgctgatccgcgaagggatgcgcaagaagcaggtt
gccgccattgcccgcaccgttctgtttcgccgccttcggacaatgatgatccgcgcccat
ggggcggggctgatcgctacgacattgaatttcgattatgaggttcgctcggcacaggaa
gccttcgaggatgtgcccgatatgaagatcaagggcgaaatgctcgatctcgccagacat
atcatcgccaccaagaaaggcagtttcgatgccagtgaattcgacgaccgctatgaagcc
gcgctcgcagaattggtaaaagccaagatcgaaggcaaaaagatcccgcaacgcaagccg
gcgaaagtcgccaaggttacggatcttatggaggctctgcgccagagcgccggcatggct
ggccaaggcaagacaggcgtcaaacattccgccaagaaatcgcgtgcggcatccggcaag
gcagcaaaatcgcgtgccgcctcctcctcgcggacacaacgcaaggcgagctga
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