Rhizobium sp. AB2/73: I8E17_31170
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Entry
I8E17_31170 CDS
T10377
Name
(GenBank) DeoR/GlpR transcriptional regulator
KO
K20271
DeoR family transcriptional regulator, repressor of opine catabolism and conjugal transfer
Organism
rhib Rhizobium sp. AB2/73
Pathway
rhib02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rhib00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
I8E17_31170
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rhib03000
]
I8E17_31170
Transcription factors [BR:
rhib03000
]
Prokaryotic type
Helix-turn-helix
DeoR family
I8E17_31170
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DeoRC
HTH_DeoR
HTH_11
HTH_20
HTH_5
GntR
HTH_IclR
MarR
Mga
MarR_2
HTH_36
AcetylCoA_hydro
DUF7342
DUF4423
HemN_C
Motif
Other DBs
NCBI-ProteinID:
UEQ85474
LinkDB
All DBs
Position
pAtAB2-73d:70501..71274
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AA seq
257 aa
AA seq
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MFNSTQDRQAKIVELLRGEQFLSIGKLTDHFQISVATARRDLSELHEAGLLRRTHGGAVS
VSQVAQDKPNAARAVSHQAEKAVIAAAAAAMIKDGDAVLLDAGTTALEVAKCLSGRAGLT
VISNGVDIVAELIGGETQNVYSVGGEYTETNRSFRGPLAEQFIRQFNVDKLVLNASSIDL
DRGLICTASPLNASVQKAMIEVASRVIVVADHSKFTKSSLSVTARIDDVAVIVSDAGAKG
IIETVPEKLRKKFVIAN
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
gtgttcaactcgacgcaggaccgccaggctaaaattgtcgagctgttacgaggcgagcag
tttctgtccatcgggaagctgactgaccatttccagatttcagtagcgaccgcgcggagg
gatctaagcgagctccatgaggctggtcttttgcgcaggacccatggcggagctgtcagc
gtctctcaggttgctcaggataagccgaacgctgctcgagccgtttcgcaccaggcggag
aaagcggtaatcgctgctgcggccgcagcgatgataaaggacggagacgctgtccttttg
gatgccggtaccacagccctcgaagtggcgaagtgcctttcggggcgcgctggactgacg
gtgatctcgaacggtgtcgatattgtcgccgaattgatcggtggcgaaacgcaaaacgtc
tattcggttggcggggaatataccgaaaccaaccgctctttcagggggccgctcgccgag
cagttcatacggcagtttaatgtcgacaaattggtcctcaatgccagctcgatcgatctg
gatcgggggctgatctgcacggcgtcacccctgaacgcaagtgtgcagaaggccatgatc
gaggtcgcaagccgcgtcatcgttgtggcggatcattcaaaattcacgaaatcgagcctc
tcggtgaccgccaggatcgacgacgtcgctgtgatcgtcagtgacgccggcgcaaaaggc
atcatcgagacagtaccggaaaagctgcggaaaaagttcgtcatcgcgaactga
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