Rhizobium sp. C104: MF410_10360
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Entry
MF410_10360 CDS
T11756
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
rhic Rhizobium sp. C104
Pathway
rhic03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
rhic00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MF410_10360
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rhic03021
]
MF410_10360
03400 DNA repair and recombination proteins [BR:
rhic03400
]
MF410_10360
Enzymes [BR:
rhic01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MF410_10360
Transcription machinery [BR:
rhic03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
MF410_10360
DNA repair and recombination proteins [BR:
rhic03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
MF410_10360
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_XRCC3_RpoA
IDH
Motif
Other DBs
NCBI-ProteinID:
ULJ80298
LinkDB
All DBs
Position
complement(1858614..1859624)
Genome browser
AA seq
336 aa
AA seq
DB search
MIQKNWQELIKPNKVEFSSSSRTRATLVAEPLERGFGLTLGNALRRVLLSSLRGAAVTAV
QIDGVLHEFSSIPGVREDVTDIVLNIKEIAIKMDGDDAKRMVVRKQGPGVVTAGDIQTVG
DIEILNPEHVICTLDEGAEIRMEFTVNNGKGYVPAERNRAEDAPIGLIPVDSLYSPVKKV
SYKVENTREGQVLDYDKLNMTIETDGSITGEDAVAFAARILQDQLGVFVNFDEPQKETEE
EAVTELAFNPALLKKVDELELSVRSANCLKNDNIVYIGDLIQKTEAEMLRTPNFGRKSLN
EIKEVLASMGLHLGMEVPAWPPENIEDLAKRYEDQY
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgattcagaagaactggcaggaactgatcaagccgaacaaggtggagttctcctcgagc
tcgcgcaccagggcgacgcttgttgccgaaccgctggagcgcggcttcggcctcaccctc
ggcaatgcgcttcgccgcgttctgctctcctcgctgcgcggcgctgccgttacggcggtg
cagatcgatggcgtgctgcatgaattctcctcgattccgggcgtccgcgaagacgtgacg
gacatcgtgctcaacatcaaggaaatcgccatcaagatggatggcgacgacgcaaagcgc
atggtcgtgcgcaagcagggcccgggcgttgtcacggctggcgacatccagacggtcggc
gatatcgaaatcctcaaccccgagcatgtcatctgcacgctcgacgagggcgccgaaatc
cgcatggagttcaccgtcaacaacggcaagggctacgttccggctgagcgcaatcgtgcg
gaagatgctccgatcggtctcatcccggtcgacagcctctattcgccggtcaagaaggtg
tcctacaaggtagaaaatacccgcgaaggacaggttctcgactacgacaagctgaacatg
accatcgaaaccgatggctcgatcaccggcgaagacgccgtcgcttttgcggcgcgcatt
ctccaggatcagcttggcgtcttcgtcaacttcgacgagccgcagaaggaaaccgaagag
gaagcagtcaccgaactcgctttcaacccggctctcctgaagaaggtggacgaactcgaa
ctgtcggtccgttcggcaaactgcctgaagaacgacaacatcgtctacatcggcgacctc
attcagaagaccgaagcagaaatgctccgcacaccgaattttggtcgcaagtcgctgaac
gaaatcaaggaagttctcgcttccatgggcctgcacctcggcatggaagtgccggcatgg
ccgcccgagaacatcgaagatctcgccaagcgttacgaagaccaatattga
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