Rhizobium sp. C104: MF410_20955
Help
Entry
MF410_20955 CDS
T11756
Name
(GenBank) translocation/assembly module TamB domain-containing protein
Organism
rhic Rhizobium sp. C104
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TamB
TamB_N
Motif
Other DBs
NCBI-ProteinID:
ULJ80815
LinkDB
All DBs
Position
complement(4022855..4029598)
Genome browser
AA seq
2247 aa
AA seq
DB search
MQMLAKIVNWFLRLTAYGVGAILILAVLALAIFGFTAFGARIVTEKIASTLSNRDMTITV
REPQGLLTGGLRAAEITVSDTRGVFAEIHGIGIDWNPLALLTGTFHAKRFEIEAIDVLRK
PVRTLPSRPAAENAGGFSLPIKVDIDRVALPDIKLAESFAGRAFALAAEGSLSANRDGGE
AIVNVRRHAVPDARLVADIAYAPAENRLRLKAQLAEPKGGLLAGFLGLPDNPAVNIDLDG
QGPISDWRGKVQAALDGQQRAAIEARHQISADGLHHLDLKGGGDLSSLLPAAFRPLFAGQ
TNIDLATTFNDHGKIDIQTGNIATGSVVIAASGTLDPAGNNSLNANLLGTSGPVDFRWPL
AEGEARLLISGLNLALTGDAQAARLNVSGSLDTATLPQAVIGNVKLTAKSDAFNLAARSG
SVQLRLVAGDMTFAEPNLNRAVQGPVTIASPLQITPGSIGFNGTTLESANINGGLNGSYR
LADQALTGNVKLTIAPAALPAAVSGRFDGPISLESQVTGTIPSKFALSNLVVTSGTLEAA
GNVALDGSKVNADLSGRLPDIGKLITGANGGAGYAVRVGGELPAISVTANLKSPSLEMAD
RTLGNLNIDLSGLADPKAPQGKIAATGTIDGQPIAINGDISSADGRMRIPALTADIGGNR
LTANLEFSPALQPTGALTFDFPNIGLLAALGGQKAEGDLKGSLGVVSDNGKIALKLRATG
ASIRRDTLAIVKPDIDVTVSDLSTFAANGTVKAEELNAGANRLAGLALGFTRQQNQTDFD
LNAAYDGNPVLAAGNIEMADGAIDLNLDRFSASPRNIPVELAAPTQVAITGGTASLTGLT
LKTGTGSVSVTGSAGETLKLDADIHDLPAALANGFVPNLSAGGTISGKIAVTGTPAAPVA
DFKLDWKDATTGQTKGAGLAPLGITAGGKFADNKLDFDTTIGSGDGLSLKAAGNVALADP
KAPVLNIDADILNLPARIANGFVPDLAAAGVITGKVSATGPLSAPTANFDLDWKDAATSH
TKRAGLGDLAVKASGKFAHNKLDFDTAIAGADSLSLKANGNVAVTGTTIGNVEVDATLKN
IPAGIANSFVADLAAKGAISGTVSAAGSLAAPTASFDLSWKDAGTSHTKRAGLGDLAVKA
SGKFADNKLDFDTAIAGADSLSLKSNGNVAVTGTTIGNVEVDATLKNIPAGIANSFVADL
AAKGAISGTVSAAGSLAAPTANFDLSWKDAGTSHTKRAGLADLAVKASGKFADNKLDFDT
AIAGADSVSLTANGNVAVTGTMIDNIKVDATLKNIPAGIANSFVADLAAEGAISGTVSAA
GSLAAPTANFDLDWKDAATSHTKRAGLAALGLTAAGKFADNKLDFNAAASGAEGLSLKST
GNVALVGTTVENIKVDAEIAKIPASLANAFVPDLAAGGTISGTLSAAGTPAAPNADFKLA
WTDAATSHTRSAHLSGLALAASGHFADNRLDFDADLGGKDGLSLKAKGNVATAGTSVRNL
DVKADLANLPAALANGFIPGLAAEGTVSGTASVSGALPKPAVDFKLDWKNAATAQTKNSG
LSGLSAAASGKYADDRVDFDANLAGKDGVLAKATGGVTIAGTAIRDLSINADIPALPANI
ANAFVPGLGAEGTLSANAVTSGTPENPIVDFKLDWKDAATSHTKAAGLSRLALAATGKYA
GDRLDFDANLSGSGGIALKAAGNLSLAGTSIRAVDATVNASNVPAAIANSFVPGLGAEGA
VSATAKATGALSAPSVDFKVDWKNAATSQTKGAGLSPFTIGASGKLAGNRLTVDTSLVGD
AGMSLKGGGSVVITGNRALDMRFNGNLPFAVLGAPLAQQGLVADGVATLNLQVGGTAAAP
VINGTVSTNGAKLVDVRRNLAVNNLAATVTFNGSQAVISRLSGSLGGGGTISASGTIGIQ
PAGGFPADISIKLDQAVYVDGTLVVSTVNGTLGLRGPIMNSTLSGKLRLDKTSITVPEKL
PTSLREIDIRHKNAPRAVLAQLRDDGERKPTEKSSTITLDLEIDAPSHIFARGRGIDAEL
GGKVTIRGTAAAPIVTGGFTMRRGRMTILNRRLDFTDKSRITFAGDLTPALDMEATSTSG
STTLTVDVAGLATDPTITFSSSPQLPQDEVLAQLIFGQSMSKLSPVQIAQLADAVSQLAG
NRSTSLFEGLRNQLGVDDLDISTDSKGQTSVSVGRYLNDRTYFELQQGGAAGAKAIINLD
VGRGVKLRGAAGGNGAGEAGVVYEREY
NT seq
6744 nt
NT seq
+upstream
nt +downstream
nt
atgcaaatgctggcaaaaatcgtcaactggttcctgcggctcaccgcctacggcgtgggc
gccatcttgattcttgccgtcctggcactggcgatcttcggcttcaccgcctttggcgcc
cgcatcgttaccgaaaagatcgcctcgacgctgtccaaccgcgacatgacgattacggtg
cgtgagccgcaaggtcttttgaccggcgggcttcgcgccgccgagatcaccgtctccgat
accaggggcgtctttgcggaaattcacggcatcggcatcgactggaacccgctggcactt
ctgaccggaaccttccatgccaaacgcttcgagatcgaagcgatcgacgtgctgcgcaag
ccggtgcgcaccctgccctcgcggcccgcagcggaaaatgccggcggcttcagccttccg
atcaaggttgatatagatcgcgtcgcgctgcccgatatcaaactggccgaatcgtttgcg
ggacgcgccttcgcgctcgctgccgaaggcagcctgtcggcaaaccgcgatggcggcgag
gcgattgtcaatgtccgccgtcatgccgtcccggatgcacggctggtcgccgatatcgcc
tatgcgccagcggaaaaccggctgcggctgaaagcgcagcttgccgaaccgaagggtgga
ctgctggcaggttttctcggcctgcccgacaatcccgccgtcaacatcgatctcgacggc
cagggaccgatatccgactggaggggcaaagtgcaggccgctctcgacggacagcagcgc
gccgcgatcgaggcccggcatcagatcagtgcggacggactgcaccacctcgacctcaag
ggcggcggcgacctgagctcgctgcttccagctgcgttccggccgcttttcgccggccag
accaatatcgatcttgctaccaccttcaacgaccacggcaagatcgatatccagaccggc
aatatcgccaccggcagcgtcgtcatcgctgcctcgggcacgctcgatccggccggcaac
aacagcctgaacgccaatctgctcggcacatcggggccggtcgatttccgctggccgctc
gccgaaggcgaagcacgcttgctgatctcaggcctcaacctggccctgacgggcgatgcg
caggcggcccgactgaatgtcagcggctcgctcgataccgcgaccctgccgcaagccgtt
atcggcaatgtcaagctgacggcaaagagcgacgccttcaatctcgccgcccgatccggc
agcgtccagctgcgtctcgttgccggcgacatgacctttgcggagccgaacctcaatcgt
gccgtccagggcccggtcacgatcgcctcgcccctgcagataacgcccggcagcatcggc
ttcaacggcaccaccctcgaaagcgccaacatcaacggcggcctcaacggctcgtaccgg
ttggcagaccaggcgctgaccggcaacgtcaagcttaccatcgccccggcagccttgccg
gctgcggtctcgggcaggttcgacgggccgatctcgctggaaagccaagtgaccggcacc
attccgtcgaaattcgcgctgtccaacctcgtcgtgacctccggcacgcttgaggccgcc
ggcaatgtcgcgctcgacggctcgaaggtgaatgccgatctttccggccggctgcccgac
atcggcaaactcatcaccggcgccaacggcggggccggatatgcggtaagagtgggcggc
gagctgccagccatctcggtgacggccaatctcaagtcccccagccttgaaatggccgac
cggacgctcggcaacctcaatatcgacctgtcgggtcttgccgatcccaaggcgccgcag
ggcaaaattgccgccaccggcacgatcgacggccagccgatcgccatcaacggcgacatc
agctccgcggacggccggatgcgtattccggcactgaccgccgatattggcggcaaccgg
ctgaccgccaatctggaattctcgcccgccctgcagccgaccggcgccctgaccttcgac
ttccccaatatcggcctgctcgcggcactcggcgggcagaaggccgaaggcgatctcaag
gggtcgcttggcgtcgtcagcgacaacggcaagatcgcgctgaagctgcgtgcaacaggc
gcctcgatccgccgtgatacgcttgcgatcgtcaagccggatatcgatgtcacggtcagc
gatctctccacttttgcggcaaacggcacggtcaaggccgaggaactgaatgctggagca
aacaggcttgccggccttgcgctcggttttaccaggcagcagaaccagaccgatttcgat
ctcaatgccgcctatgacggcaacccagtgctggccgccggcaatatcgagatggccgat
ggggcgatcgaccttaaccttgaccgcttttcggcaagcccccgcaatatcccggtcgaa
cttgcggcaccgacgcaggtcgcaatcaccggcggcaccgccagcctgaccggcctgacg
ctgaaaacaggcaccggctcggtaagcgtcaccggttcggccggcgagacgctgaagctc
gatgccgacattcacgacctgccggccgctctcgccaacggtttcgtaccgaacctttcg
gccggcggcacgatctccggaaagattgccgtgaccggaacgccggccgcacccgtcgcc
gacttcaagctcgactggaaggatgcgacgactggccagaccaagggagccgggctggcg
ccgctcggcatcaccgccggcggcaaattcgccgacaataagctcgatttcgacacgacg
atcggcagcggtgacggcttgtcgcttaaggccgccggcaatgttgcactcgccgacccg
aaggcgccggtgcttaatatcgacgccgatattctcaacctgcccgcccgcatcgccaat
ggtttcgttcctgatcttgccgcagcaggcgtgatcaccgggaaggtctcggcgaccgga
ccgctgtccgcgccgaccgccaatttcgatctcgattggaaagatgctgcgaccagccac
accaagcgcgccggtcttggcgacctcgcagtgaaggcatccggtaaattcgcccacaac
aagcttgatttcgacacagcgatagcgggcgccgacagcctctcgctgaaggcaaacggc
aatgtcgccgtcacaggcacgacgatcggcaacgtcgaggtcgatgcaacgctcaaaaat
atcccggcgggcatcgcaaacagcttcgtcgccgatcttgccgccaaaggcgcgatctcc
ggaacggtttcggcggcaggctcgcttgctgctcccaccgccagtttcgaccttagctgg
aaagatgctgggacgagccacaccaagcgtgccggtcttggcgacctcgcggtgaaggca
tccggtaaattcgccgacaacaagcttgatttcgacacagcgattgcgggcgccgacagc
ctctcgctgaagtcaaacggcaatgtcgccgtcacaggcacgacgatcggcaacgtcgag
gtcgatgcaacgctcaaaaatatcccggcgggcatcgcaaacagcttcgtcgccgatctt
gccgccaaaggcgcgatctccggaacggtttcggcggcaggctcgcttgctgctcccacc
gccaatttcgaccttagctggaaagatgctgggacgagccacaccaagcgtgccggcctt
gcggacctcgcggtgaaggcatccggtaaattcgccgacaacaagcttgatttcgacaca
gcgatagcgggcgccgacagcgtctcgctgacggcgaacggcaatgtcgccgtcacaggc
acgatgatcgacaacatcaaggtcgatgcaacgcttaaaaatatcccggcgggcatcgca
aacagcttcgtcgccgacctcgccgccgaaggcgcgatctccggaacggtttcggccgca
ggctcgcttgccgctcccactgccaatttcgaccttgattggaaagatgccgcgaccagc
cacacgaagcgtgccggccttgccgctctcggcctgaccgcagcgggaaaattcgccgat
aacaagcttgatttcaacgccgcggccagtggcgccgaaggcctctcgctgaagagcacc
ggtaatgtcgccctcgtcggcacgacggtcgaaaacatcaaggtcgatgccgagatcgcc
aagattccggccagtctcgcaaatgccttcgttccggacctggcggccggcggcacgata
tcgggcaccctgtccgccgccgggacccccgccgcaccgaatgccgacttcaagctcgcc
tggaccgatgccgcgaccagccacaccagaagcgctcatctatcgggactggcgcttgcc
gcctccggccatttcgccgacaaccggctcgatttcgatgccgatctcggcggcaaggac
ggcctctcgctaaaagccaagggcaatgttgcaacggcaggcacctcggtccgcaatctt
gacgtcaaggccgatctcgccaatctgccggcagcgctcgccaacggcttcatccccggt
cttgccgccgagggcacggtgtcgggaaccgcatccgtctccggcgctctgcccaaaccc
gccgtcgatttcaagctcgactggaagaacgccgcaaccgctcagaccaaaaacagcggc
ctttccggcctgagcgcggcggcatccggaaaatacgccgatgacagggtcgacttcgat
gccaaccttgccggcaaggacggggtgctggccaaggccaccggcggcgtcaccatcgcc
ggaacggccatccgcgatctttcgatcaatgccgatattcccgcacttccggccaatatc
gccaatgccttcgttcccggcctcggtgccgaaggcacactttcggctaacgccgtcacg
tcgggaacgcctgaaaatccgatcgtcgatttcaagctcgactggaaggatgcggccacc
agccacaccaaggctgccggcctctcccgcctggcgctggcggcgacgggaaaatacgcc
ggtgaccggctcgatttcgatgccaatctcagcggcagcggcggcattgcgctgaaagcc
gccggtaatctttcgctcgccggcacctctatccgcgcggtcgatgccaccgtgaatgcc
tccaatgttccggctgcgatcgccaacagctttgttccgggccttggagccgaaggcgcg
gtctcggcaaccgcaaaggccaccggcgcgctatcggcgccctcggtcgatttcaaggtc
gactggaagaacgccgcaaccagccagacaaaaggcgccggcctttcgccgttcaccatc
ggcgcatcaggcaaacttgccggaaacaggctgacggtcgacaccagtcttgtcggtgat
gccggcatgtcgctgaagggcggcggcagcgtcgtgatcaccggcaatcgcgccctcgat
atgcgcttcaacggcaatcttcccttcgccgtgcttggcgcgccactcgcgcaacagggc
ctcgtcgccgacggcgtcgccaccctcaacttgcaggttggcggaaccgcggcggcacct
gtcatcaacggcaccgtctcgaccaatggcgccaagctcgtcgatgtccggcgcaatctc
gccgtcaacaatctcgcggcgacggtcaccttcaacggcagccaggcagtgatatcgcgc
ctcagcggcagcctcggcggcggcggcacgatttcggcaagcggcaccatcggcatccag
ccggccggcggctttcccgccgatatttcgatcaaactcgaccaagcggtctatgtcgat
ggaacgcttgttgtctccacggtcaacggcacgctcggcctgcgcgggccgatcatgaat
tcgacgttgagcggcaagcttcggctggacaagacctcgatcaccgtcccggaaaaattg
ccgacctcgctcagggaaatcgacatccgccacaagaatgcgccgcgagcggtgcttgcc
cagttgcgcgacgatggcgaacggaaacccaccgagaaatcctccacgatcaccctcgat
ctcgaaatcgacgcgccttcgcatatcttcgcacgtggccgcggcatcgatgccgagctc
ggcggcaaggtgacgatccgcggaacggcggcagcgccgatcgtaaccggcggattcacc
atgcgccgcggccgcatgaccattctcaaccgccgtctggatttcaccgacaaaagcagg
atcacattcgccggcgacctgacgccggcgctcgatatggaagcgacctcgacctccggc
tcgacgacgctgaccgtcgacgtcgccggacttgccaccgacccgacaattaccttttcc
tcctcgccgcagctgccgcaggacgaggtgctggcgcagctgatcttcggccagtcgatg
tccaaactctcgccggtgcagatcgcccagctcgccgacgccgtcagccagctggccggc
aaccgctcgacctcgctttttgaaggcctgcgcaatcagctcggcgtcgacgatctcgat
atcagcaccgattccaagggccagacgagcgtcagcgtcggccgttatctcaacgaccgc
acctatttcgaattgcagcagggcggcgcagccggcgccaaggcaatcatcaacctcgac
gtcggccgcggcgtcaagctgcggggtgccgccggcggtaatggtgccggcgaagcgggt
gtcgtctacgaacgggaatattga
DBGET
integrated database retrieval system
