Rhizobium hidalgonense: FFM81_004055
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Entry
FFM81_004055 CDS
T07043
Symbol
speC
Name
(GenBank) ornithine decarboxylase
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
rhid
Rhizobium hidalgonense
Pathway
rhid00330
Arginine and proline metabolism
rhid00480
Glutathione metabolism
rhid01100
Metabolic pathways
rhid01110
Biosynthesis of secondary metabolites
rhid04148
Efferocytosis
Module
rhid_M00134
Polyamine biosynthesis, arginine => ornithine => putrescine
Brite
KEGG Orthology (KO) [BR:
rhid00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
FFM81_004055 (speC)
09106 Metabolism of other amino acids
00480 Glutathione metabolism
FFM81_004055 (speC)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
FFM81_004055 (speC)
Enzymes [BR:
rhid01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
FFM81_004055 (speC)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
OKR_DC_1_N
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
QKK22576
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Position
866246..868609
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AA seq
787 aa
AA seq
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MIPRDVKAPTVAIPFHKMLKIVAIIDRDNSQAQELVSQITAQGFEVEQRDAYSADVSEDA
DVGAYIGSVEGGRLPSARSFLRSVRDIGFRTPIWAMADTLTIAHMDVVEMAGEVDGFVYL
GQQTPTFYAKQIVSSAVNYGKSLLPPFFGGMMAYDGEANIAFDCPGHQGGQFYRKSPAGQ
LFFKYFGESIFRNDLCNADVDLGDLLIHEGPAVEAQKQAARIFGADRTYFILNGTSTSNK
VVANAVLRSGDLVLFDRNNHKSLHQGALVQAGAIPIYLPTARNSFGMIGAVDWAAWDEGL
LRRKIEEHPLVTDKSRAKAERPFRLACIQLATYDGTIYNVSQVMEKIGHLCDYVLWDEAW
IGYNAFHPLFDGHSPMRLKGLTADMPGLFSTQSVHKQGAGFSQASQIHKRDEHIKGQRRF
VEHKRFNESLLMSVSTSPFYPLFASLDVNAKVHEGKAGEMLWDRCIELGIEVRKKLRGFV
DHYESKAASTEEQWFFDPFVPDRVSVVGSKHTGDLADTKWEDIPTDVLKREQQCWRFDPE
ASWHGYAGYSPGYTMVDPNKLTLLTPGIDRTTGEYREFGIPATVVANYLREQRVVAEKCD
LNSLLFLLTPAEDESKLNTLVAKLVKFKNLCDRDAPLPEVLPTVFAANRERYAGYTVRQV
CKEMHSFYRSAGVKDLQRLCFRSESFPEPAIAPKQAYEALVANNVDYVPLAEAAGRISAT
LALIYPPGIGVIVPGERWDDRARPMRDYFLAFEESFNRFPGFNYEVQGVFQERIDGRIKF
YTYVVRE
NT seq
2364 nt
NT seq
+upstream
nt +downstream
nt
atgatcccgcgtgatgtgaaggctccgacggtcgccatacccttccacaagatgttgaag
atcgtcgcgatcatcgaccgtgacaattcccaggctcaggaactggtgtcacagatcacc
gcccagggcttcgaggtggagcagcgcgacgcctactcagccgacgtgtccgaagatgcg
gacgttggcgcctatatcggctcggtcgagggcgggcggcttccttcggcgcgcagcttc
cttcgttccgtcagagacatcggcttccgtacgccaatctgggcaatggccgatacgttg
acgattgcgcatatggatgtcgtcgagatggccggcgaggtggatggtttcgtctatctc
ggccagcagacgccgaccttctatgccaagcagatcgtgtccagtgcggtcaattacggc
aagtcgctgctgccgcccttcttcggcggcatgatggcctatgacggcgaggccaacatc
gccttcgattgcccagggcatcagggcggccagttctatcggaaatcgccggccggccag
ctcttcttcaaatatttcggtgagagcatcttccgaaacgacctatgcaatgccgacgtc
gatctcggcgatctcctgattcacgaaggtcccgccgtcgaagcccaaaagcaggcggcc
cgcatcttcggagcggaccgcacctatttcatcctgaacggcacgagcacctccaacaag
gttgtcgccaatgcggtgctgcgcagcggcgatctcgtgctcttcgatcgcaacaatcac
aaatccctgcatcagggcgctctcgtgcaggccggcgccatcccgatctatctgccgact
gcccgcaattccttcggtatgatcggcgcagtcgactgggcggcctgggacgagggcttg
ctgcggcgaaagatagaggaacatccactcgtcaccgacaagagccgcgccaaggcggag
aggcctttccgtctcgcctgcatccagctcgcgacctatgacggcacgatctacaatgtc
agccaagtcatggagaaaatcggccatctctgcgactacgtgctctgggacgaagcctgg
atcggctacaacgccttccacccgctcttcgacggccatagcccgatgcgtctcaaaggc
ctcacggctgatatgcccgggctgttctccacccagtcggtccacaagcagggcgccggt
ttctcgcaggcatcacagatccacaagcgggacgaacatatcaagggccagcgccgcttc
gtcgaacacaagcgcttcaatgaatcgctgctgatgagtgtctcgacctctcccttctat
ccgctgtttgcctcgctcgacgtcaacgccaaggtgcatgagggcaaggccggcgagatg
ctttgggatcgctgtatcgaactcgggatcgaggttcgcaagaagctgcgcggtttcgtc
gatcattacgagtccaaagccgcaagcaccgaggaacaatggttcttcgatcccttcgtg
ccggacagggtctcggtcgtgggctcgaaacatacgggcgatcttgccgataccaaatgg
gaggatatcccgaccgatgtgctgaagcgcgagcagcaatgctggcggttcgatccggag
gcgagctggcatggttatgccggctattcgcccggctacaccatggtcgatcccaacaag
ctcacactgctcaccccgggcatcgaccggacgaccggcgaatatcgtgagttcggcatc
ccggcgactgttgtcgctaactacctgcgcgaacagcgggtggtggcggaaaaatgcgat
ctgaacagcctgctcttcctgctgacgccggcagaggacgaaagcaagctgaatacgctc
gtcgccaagctggtgaagttcaagaacctctgcgatcgcgatgcgccattgccggaggtg
ctgccgaccgtatttgcggccaaccgcgaacgctatgcaggctacacggttcggcaggtc
tgcaaggagatgcattccttctatcgtagtgccggcgtcaaggacttgcagcggctctgc
ttccgctccgagagttttccggagccggcgatcgcaccgaaacaggcctatgaagcgctg
gtcgccaacaatgtcgactacgtgccgctcgccgaggctgccggccgcatttcggcgacg
ctggcgctgatttatccaccgggtatcggtgtcatagtgcccggagagcgctgggacgac
cgggcgcggccgatgcgggactatttcctggccttcgaggaatccttcaaccgcttcccg
ggattcaattatgaggtccagggcgtgttccaggaacggatcgacgggcggatcaagttc
tatacgtatgtcgtgcgcgagtag
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