Rhizobium hidalgonense: FFM81_006990
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Entry
FFM81_006990 CDS
T07043
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
rhid
Rhizobium hidalgonense
Pathway
rhid03030
DNA replication
rhid03430
Mismatch repair
rhid03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rhid00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FFM81_006990
03430 Mismatch repair
FFM81_006990
03440 Homologous recombination
FFM81_006990
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rhid03032
]
FFM81_006990
03400 DNA repair and recombination proteins [BR:
rhid03400
]
FFM81_006990
Enzymes [BR:
rhid01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FFM81_006990
DNA replication proteins [BR:
rhid03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
FFM81_006990
DNA repair and recombination proteins [BR:
rhid03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
FFM81_006990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Dit_C
Motif
Other DBs
NCBI-ProteinID:
QKK23114
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All DBs
Position
1485362..1485952
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AA seq
196 aa
AA seq
DB search
MKTIAIDFETANEQRGSACSVGLAWIEEGRVTRVEERLIRPRDMRFSGMNIAIHGIRPEH
VEDAPEFPEVMDEFHDDISGATMIAHNAAFDFSVWRASLDHYRQSYPELTYLCSLKMAQR
IWPHFLSHRLNLIAEHLGLRFVHHNAAEDAVVCAAAAIEMAKAVKANAVHAIPALIGMRP
GRLTAQAYEPCTCRKG
NT seq
591 nt
NT seq
+upstream
nt +downstream
nt
ttgaagaccatcgcgattgacttcgagacggcgaacgaacagcgcggcagcgcctgttcc
gtcggccttgcctggatcgaggagggcagggtcactcgtgtcgaggaacggctgatccgg
ccgcgggacatgcgcttttccgggatgaacattgcgatccatggcattcggccggagcat
gtcgaggatgcacctgaatttcccgaggtgatggacgagttccacgacgatatcagcggc
gccaccatgatcgcccataatgccgctttcgatttcagcgtctggcgggcgagcctcgat
cactaccggcaatcctatccggagctgacctatctctgcagcttgaagatggcgcagcgg
atctggccgcacttcctctcgcatcgtttgaacctgatcgccgagcatctcggcctgcgt
ttcgtgcaccacaacgccgccgaggacgccgtcgtctgcgcggccgctgccatcgagatg
gccaaagcggtcaaggccaatgccgttcacgccatacccgcgctgatcggcatgcggccc
ggccggctgacggcgcaggcctacgagccctgcacgtgccggaaaggctga
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