Rhizobium hidalgonense: FFM81_011885
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Entry
FFM81_011885 CDS
T07043
Symbol
secDF
Name
(GenBank) protein translocase subunit SecDF
KO
K12257
SecD/SecF fusion protein
Organism
rhid
Rhizobium hidalgonense
Pathway
rhid02024
Quorum sensing
rhid03060
Protein export
rhid03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
rhid00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
FFM81_011885 (secDF)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
FFM81_011885 (secDF)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
FFM81_011885 (secDF)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
rhid02044
]
FFM81_011885 (secDF)
Secretion system [BR:
rhid02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
FFM81_011885 (secDF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SecD_SecF_C
SecDF_P1_head
Sec_GG
SecD_1st
ACR_tran
MMPL
SecD-TM1
QcrA_N
Motif
Other DBs
NCBI-ProteinID:
QKK23991
LinkDB
All DBs
Position
complement(2471171..2473711)
Genome browser
AA seq
846 aa
AA seq
DB search
MLHFSRWKTLLIWLAAFAAIIIAAPNLLSEAQRSSLPGWLRHDRVTLGLDLQGGSHIVLK
VERSDIVKDRLEEVVANVRNALRGAGIRYTGLTGNDQTVTVRITDPAETQKAVDLLKPLT
TAGGRSGPDIALQQGEEGQLSLQISDAGITSDVASARTRSLDIVSRRIAGFGYENFLVRP
DDADRIVVQVLGSVDAERLKNLLNQTAKLSFHLIDASMSGQEALNGRWPATSQVLYSLDD
PPVPYLVDRTAFANASNMVDIEPVVDPQTQDTSIAYRLDAEGTRRLAEVTGQNIGKHLAI
VFDDQVMSAPSIDAAITGGEGAISANFSEDGVRDLAIMLRAGALPATLTSVEERSVSPRF
GADSIFSGLVAGLVAVVLVAALMIVLYRILGVIAVVSLVFNLIFIIAVLSLAGATLTLPG
IAGIVLIVGMAVDSNVLIYERIREEERTAHSFADAVSRGFQRAFATIVDANVTIFIAAII
LFFLGSESIRGFAVTLAVGILATVFTAFTLTRSIVAIWLKGRHPRHLPKSVLTHLFEHAN
IRFMGIRRYVFTASAIISLIAMAAFATAGLRLGIDFTGGSLIEVTAKQGNADLADLESRL
NDLNLGEISVQRTGGPSNARIRIASQGGGENAEQSAATLVRGELQEDYDFRRVEVVGPAI
SGELTMMATLGVLAALAAILIYIWIRFEWQFAVGAIIATLHDVIIMLGLFVLTGMEFNLT
SVAALLTVVGYSLNDTVVVYDRMRENLKRYKKMPLPILIDASINQTLSRTILTAATTLLA
LLALYLFGGEVIRSFTFTMLFAVALGTFSSIYIAAPVLIVFRLRPASPDEEESNKTDAGI
KSGTVV
NT seq
2541 nt
NT seq
+upstream
nt +downstream
nt
atgttgcatttttcccgctggaaaacacttctgatctggttggccgcgtttgcggccatc
atcatcgctgcgcccaatctgctgagcgaagcgcagcgttcctctctgccaggctggctg
cggcacgaccgcgtgacgctcggtctcgatctgcagggcggttcgcatatcgttctgaag
gtcgagcgttccgatatcgtcaaggaccgcttggaagaagtggtcgccaatgtgcgcaac
gcgctgcgcggcgccggcatccgctataccgggctgaccggcaacgaccagaccgtcacc
gtccggatcaccgatccggctgagacgcagaaggcggtcgatcttctgaagcctttgacg
acggccggcggacgttccgggcctgacatcgcgctgcagcagggcgaagagggacaactg
tcgctgcagatttccgacgccggcatcacctccgacgtcgcctccgcccgaacgcggtca
ctcgatatcgtcagccgccgaatcgctggcttcggctatgaaaatttcctcgttcgcccc
gatgatgccgatcggatcgtcgtgcaggtgctgggatcggttgatgcggagcggctgaag
aacctcttgaaccagacggccaagctttcctttcatctgatcgacgcaagcatgtcgggg
caggaggcgctgaacggccgctggccggcgacatcgcaggtgctctattcgcttgacgat
ccgccggtcccctatcttgtcgaccgcacggctttcgccaacgccagcaacatggtcgat
atcgagccggtcgtcgatccgcagacccaggatacatcgattgcctaccgcctcgatgcc
gaaggcacgcggcggctggctgaggtgacggggcagaatatcggcaagcaccttgccatc
gtcttcgacgaccaggtgatgtcggcgccaagcatcgatgcggcgatcaccggcggcgag
ggcgcgatttcggcgaatttctccgaggatggcgtccgcgacctcgcgatcatgctgcgc
gccggcgccttgccggcgacgctgacgagcgtcgaggagcgcagcgtcagtccgagattc
ggcgccgactccatcttctccggcctcgttgccggcctcgtcgccgtcgtgctggtcgca
gcactgatgatcgtgctctaccgcattctcggcgttatcgccgtcgtctcgctcgtcttc
aacctgatcttcattatcgcagtgctcagccttgccggcgcgaccctcaccttgcccggc
attgccggcatcgtgctcatcgtcggcatggcggtcgattccaacgttctgatctacgag
cgtatccgtgaagaggagagaaccgcccactcctttgcagacgccgtcagccgcggtttt
cagcgcgcctttgcaaccatcgtcgatgccaatgtcacgattttcatcgccgccatcatc
ctctttttcctcggcagcgaatccatccgcggtttcgcggtgacgctggcggtcggcatt
ctggcgaccgtcttcacggctttcacgctgacgcgttcgatcgttgccatctggctgaaa
gggcgccatccccggcatctgccgaagagcgttctgacccatcttttcgaacacgccaat
atccgtttcatggggatccggcgttacgtttttaccgcctcggcgatcatctcgttgatc
gccatggccgcctttgccaccgccggcctgcgtctcggcattgatttcaccggcggctcg
ctcatcgaggtgacggcgaagcaaggcaatgccgacctcgccgatcttgaatcacgcctc
aacgatctcaatctcggtgagatcagcgtccagcgtaccggcggcccgtcgaatgcgcgg
atccgcatcgcctcccagggcggcggcgagaatgccgagcagtcggcggcgacgctggtg
cgcggcgaactccaggaggattatgattttcgccgcgtcgaggtcgtcggccccgcgatc
tccggcgaattgacgatgatggcgacgctcggcgtgctggcagcgttggcggcgatcctg
atctacatctggatccgcttcgaatggcagtttgcggtcggcgccatcattgccacgctg
cacgacgtcatcatcatgctcggtctcttcgtgctgaccggcatggaattcaacctgacg
agcgtcgccgccttgctgaccgttgtcggttattccctgaatgacacggtcgtggtctat
gaccgaatgcgcgagaatctgaagcgatacaagaagatgccgctgccgatcctgatcgat
gcgtcgatcaaccagacgctgtcgcgcaccatactgaccgcggcgacgacgctgctcgcc
ttgctcgcgctctatcttttcggaggggaggttatccgctccttcacctttacgatgctc
ttcgccgtcgctctcggcaccttctcttcgatctatatcgccgctcctgtcctgatcgtc
ttccggctgcggccggcgagccccgacgaggaagagagcaacaagacggatgctggtata
aaatccggcacggtggtttga
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