Rhizobium hidalgonense: FFM81_012160
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Entry
FFM81_012160 CDS
T07043
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
rhid
Rhizobium hidalgonense
Brite
KEGG Orthology (KO) [BR:
rhid00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhid03400
]
FFM81_012160
Enzymes [BR:
rhid01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
FFM81_012160
DNA repair and recombination proteins [BR:
rhid03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
FFM81_012160
Prokaryotic type
FFM81_012160
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
QKK24037
LinkDB
All DBs
Position
2530533..2531981
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AA seq
482 aa
AA seq
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MAKDAAKPVILWFRKDLRLDDNHALAAADLSGRPIIPLYIKEPAAHSGALGAAQAWWLHH
SLEALDGSLRKRQGRLVLASGEALDVLGALISESGAEAVFWNRCYDPSGTAIDIRIKHEL
QKQAIEVSSFGGQLLHDPSRLMTGGGTPYRVYTPFWRALEGAGEPERPVEAPAKLRLAAQ
LPKSERLESWKLLPTKPDWARDFGDLWTPGEQGAREKLRSFVEDGLDGYKENRDYPAKQA
TSLLSPHLALGEISPARIWDATRGLSKRMPAADILHFRKEIAWREFSYHLLFHFPRLASD
NWNARFDGFKWRNDDDDFAAWRRGMTGYPIVDAGMRQLWRHGWMHNRVRMIVASFLIKDL
MVDWRRGEAWFRDTLVDADPANNAASWQWVAGSGADASPFFRIFNPVLQGQTFDPHGDYV
RTYLPELRELAANYIHRPFEAPESVLDSAGIILGQTYPRPIVDHASARNRALAAYDVTKH
AV
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
ttggcaaaggacgcggcaaaaccggtcatactgtggtttcgcaaggatttgcgccttgac
gacaaccatgcgctcgcggcagccgatctctccgggcgaccgatcatccctctctatatc
aaagagcccgcggcacatagcggtgcgctcggtgcggcgcaggcgtggtggctgcatcat
tcgctggaagcgctcgacgggtcgctgcgcaagcggcagggacggctggtgcttgccagc
ggcgaggcactcgacgtgcttggcgccctcatcagcgagagcggcgccgaagccgtcttc
tggaaccgatgctacgatccgtccggaacggccatcgacatccgtatcaagcacgaattg
caaaagcaggcgatcgaggtgagcagcttcggcggccagttgctgcacgacccttcccgg
ctgatgaccggcggcggcacgccctatcgtgtctacacaccgttctggcgcgcgctggaa
ggcgccggcgaaccggagcggccggtggaggcgccggcgaaactgcggctggcagcgcag
cttccgaaatcggaaaggctggagagctggaaactgctgccgaccaagccggactgggcg
agggatttcggcgatctctggacgccgggcgaacaaggcgcgcgggaaaagctccgctcc
ttcgtcgaggacgggctcgacggttataaggaaaaccgcgactatccggcgaagcaggcg
acatcgttgctgtcgccgcatctggcgctcggcgagatctcccctgcccgcatctgggac
gcgacgcgtggtctgtcgaaacggatgccggcggccgacatcctgcatttccgcaaggag
atcgcctggcgtgaattctcctaccacctgctattccatttcccgcgtcttgcttcggac
aactggaacgctcgtttcgacggctttaaatggcgcaatgacgatgacgatttcgcggcg
tggcgccgcggcatgaccggttatccgatcgtcgatgccggcatgcgccaactctggcgg
catggctggatgcacaatcgcgtgcggatgatcgtcgcctccttcctcatcaaggatctg
atggtcgactggcgccggggcgaggcatggtttcgcgacacgcttgttgatgccgacccc
gccaacaatgcggcaagctggcagtgggtggcgggctcgggagccgatgcgtcgccgttc
ttccggatcttcaatccggtgctgcagggccaaaccttcgatccgcacggcgactatgtc
agaacttatctgcctgagcttcgagaactcgcggcaaactacatccatcggccgttcgag
gcaccggagagcgtgctcgactcggcaggcatcattcttggccagacctatccgagaccg
atcgtcgatcacgccagcgcgcgcaaccgggcgctggccgcctacgacgtcacaaagcat
gccgtatga
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