Rhizobium hidalgonense: FFM81_013555
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Entry
FFM81_013555 CDS
T07043
Name
(GenBank) L,D-transpeptidase family protein
KO
K21470
L,D-transpeptidase YcbB
Organism
rhid
Rhizobium hidalgonense
Brite
KEGG Orthology (KO) [BR:
rhid00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rhid01002
]
FFM81_013555
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rhid01011
]
FFM81_013555
Peptidases and inhibitors [BR:
rhid01002
]
Cysteine peptidases
Family C82
FFM81_013555
Peptidoglycan biosynthesis and degradation proteins [BR:
rhid01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
FFM81_013555
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
QKK24294
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All DBs
Position
complement(2808637..2809938)
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AA seq
433 aa
AA seq
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MSKKNGNEALSRRAFLASAATVGASAIAAPAFAQSAIDTLINAPRRGNWDDQFDAKAASR
TASAVVSNTPILGPQSVASAQQAIMQYQQIAAAGGWPEVNPGDQRLQLGVSHPAVQALRQ
RLAITGDLPREAGMSSAFDSYVDGAVKRFQARHGLPSDGVLGEFTLKAMNIPADVRLQQL
NTNIVRLQTFPEDLGRRHVMVNIPAAYVEAVEDGSVATRHTAVVGRLSRPTHLVNSKIYE
VILNPYWTSPRSIVEKDIMPLMRKDPTYLEKNAIRLIDGKGNEVAPETIDWNGEAPNLMF
RQDPGKTNAMASTKINFYNKNGEYMHDTPQQGLFNKLMRFESSGCVRVQNVRDLSNWLLR
ETPGWNRQQMEQVIATGVNTPVKLAIEVPVYFVYISAWGMPDGIVQFRDDIYQMDGNAEL
ALDTTAGMEQPVQ
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaagaaaaacggaaatgaagctctctcgcgccgcgctttccttgcgtccgcggca
acagttggcgccagcgcgattgccgcgccggcctttgcgcaatcggcgatcgatacgctg
atcaatgcaccgcgccgcggcaactgggacgaccagttcgacgccaaggcggcttcgcgc
acggcaagcgctgtcgtttccaacacgccgattcttggcccccaatcggtcgccagcgcc
cagcaggcgatcatgcagtatcagcagatcgcggccgccggcggctggcccgaagtcaat
cccggtgaccagcgcctgcagctcggcgtcagccaccccgcagtccaggcgctacgccag
cgccttgcgattaccggcgacctgccgcgcgaagccggcatgtcgagcgccttcgattcc
tatgtcgacggtgccgtcaagcgcttccaggcccgccacggcctgccgtctgatggtgtg
ctcggcgaattcacgctgaaggcgatgaacatccccgccgatgtccgcctgcagcagttg
aacaccaatatcgtccgcctgcagaccttccccgaggacctcggccgccgccacgtgatg
gtcaacatccccgccgcctacgtggaagccgttgaagacggcagcgtcgcgacgcgccac
accgcggttgtcggccgtctcagccgcccgacccatctcgtcaactcgaagatctacgag
gtcatcctcaacccctactggacctcgccgcgctcgatcgtcgagaaggacatcatgccg
ctgatgcgcaaggatccgacctatctcgaaaagaacgccatccgcctgatcgacggcaag
ggcaacgaagtcgcccccgagaccatcgactggaacggcgaggcgccgaacctgatgttc
cgtcaggaccccggcaagaccaacgccatggcctcgaccaagatcaacttctacaacaag
aacggcgagtacatgcacgacacgccgcagcagggcctgttcaacaagctcatgcgcttc
gaatcgtctggatgtgtccgcgtccagaacgtgcgcgacttgtcgaactggctcttgcgc
gagacccccggctggaaccgccagcagatggagcaggtgatcgcaaccggcgtcaacacg
ccggtcaaactcgccatcgaagttccggtctatttcgtctacatctccgcctggggcatg
cccgacggcatcgtccagttccgcgacgacatctatcagatggatggcaatgccgagctg
gcgctggataccacggctggcatggagcagccggttcaataa
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