Rhizobium hidalgonense: FFM81_013620
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Entry
FFM81_013620 CDS
T07043
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
rhid
Rhizobium hidalgonense
Brite
KEGG Orthology (KO) [BR:
rhid00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rhid03016
]
FFM81_013620 (rnd)
Enzymes [BR:
rhid01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
FFM81_013620 (rnd)
Transfer RNA biogenesis [BR:
rhid03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
FFM81_013620 (rnd)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
wHTH-Calcineurin_assc
Motif
Other DBs
NCBI-ProteinID:
QKK24306
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All DBs
Position
2823512..2824657
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AA seq
381 aa
AA seq
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MIETTADLAAACKELAKSDFITIDTEFLRETTFWPELCLIQMASPTTEVLVDPLAKGIDL
APFFELMADTKVLKVFHAARQDIEIIFNRGNLIPHPIFDTQVAAMVCGFGDSVSYDQLVS
RIKNVHIDKSSRFTDWSRRPLSDKQLEYALADVTHLRDVYLSLKAELDREGRTSWLSEEM
DILEARETYDMHPDDAWQRLKMRLRKPQELAILKYVAAWREREARARNVPRSRVLKDDAI
YEIAQQQPKDTEALGRLRTIPKGWERSTSGASVIEAVNAALALPKADMPHVPRQAQAPEG
AAAAVELLKVLLKLISEKHGVAPKVIANSEDLDRIAAEGEKAEVAALNGWRRDLFGEPAL
QLIQGQIALRFVGRKVETVSL
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgatcgaaaccaccgccgatttggcggccgcctgcaaagagctggccaagtccgacttc
atcaccatcgataccgaattcctgcgcgagacgaccttctggccggagctttgcctgatc
cagatggcaagtccgacgaccgaagttctcgtcgatccgctggccaagggcatcgacctc
gcccccttcttcgagctgatggccgatacgaaggtgctgaaggtctttcacgcggcgcgc
caggacatcgaaatcatcttcaatcgcggcaatctcattccgcatccgatcttcgacacg
caggtcgccgccatggtttgcggcttcggcgacagcgtctcctatgatcagctggtcagc
cgcatcaagaacgtccatatcgacaagtcgtcgcgcttcaccgactggagccgccggccg
ctctccgacaagcagctggaatatgcgctggccgacgtcacccatctgcgcgacgtctac
ctgtcgctgaaggcggaactcgatcgcgaaggccgcacctcctggctctccgaggagatg
gacattctcgaggcacgcgaaacctacgacatgcatcccgacgatgcctggcagcggctg
aagatgcggctgcgcaagccgcaggaactcgcgatcctgaaatatgtcgccgcctggcgc
gaacgcgaggcgcgggcgcgcaacgtgccgcgttcgcgggtgctgaaggatgatgcgatc
tacgagatcgcccaacagcagcccaaggataccgaagcgcttggccggttgcgcaccatt
ccgaaaggctgggagcgctcgacctccggcgcatccgtcatcgaggccgtcaacgccgcg
ctcgctcttccgaaagccgatatgccacatgtgccgcgccaggcgcaggcgcccgaaggg
gccgctgccgccgtcgaattgctgaaggtgctgttgaagctgatttcggaaaaacacggc
gtggcgccgaaggtgatcgccaacagcgaggatctcgacaggatcgccgccgagggagag
aaggccgaagtcgccgcccttaacggctggcggcgcgatcttttcggcgagccggcgctg
cagctgatccagggtcagatcgctctgcgcttcgtcggccggaaggtcgaaacggtcagc
ctctga
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