Rhizobium hidalgonense: FFM81_016860
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Entry
FFM81_016860 CDS
T07043
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
rhid
Rhizobium hidalgonense
Pathway
rhid03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rhid00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FFM81_016860 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rhid03019
]
FFM81_016860 (groL)
03110 Chaperones and folding catalysts [BR:
rhid03110
]
FFM81_016860 (groL)
03029 Mitochondrial biogenesis [BR:
rhid03029
]
FFM81_016860 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rhid04147
]
FFM81_016860 (groL)
Enzymes [BR:
rhid01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
FFM81_016860 (groL)
Messenger RNA biogenesis [BR:
rhid03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
FFM81_016860 (groL)
Chaperones and folding catalysts [BR:
rhid03110
]
Heat shock proteins
HSP60 / Chaperonin
FFM81_016860 (groL)
Mitochondrial biogenesis [BR:
rhid03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
FFM81_016860 (groL)
Exosome [BR:
rhid04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
FFM81_016860 (groL)
Exosomal proteins of other body fluids (saliva and urine)
FFM81_016860 (groL)
Exosomal proteins of breast cancer cells
FFM81_016860 (groL)
Exosomal proteins of colorectal cancer cells
FFM81_016860 (groL)
Exosomal proteins of bladder cancer cells
FFM81_016860 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
CbiA
Motif
Other DBs
NCBI-ProteinID:
QKK24902
LinkDB
All DBs
Position
3477607..3479247
Genome browser
AA seq
546 aa
AA seq
DB search
MASKEIKFGRTAREKMLRGVDILADAVKVTLGPKGRNVIIDKSFGAPRITKDGVSVAKEI
ELEDKFENMGAQMVREVASKTNDIAGDGTTTATVLAQAIVREGNKAVAAGMNPMDLKRGI
DLAVADVVKDLQAKAKKISTSEEVAQVGTISANGDKQVGLDIAEAMQKVGNEGVITVEEA
KTAETELEVVEGMQFDRGYLSPYFVTNPEKMIADLEDVFILLHEKKLSNLQSMLPVLEAV
VQTGKPLLIIAEDVEGEALATLVVNKLRGGLKIAAVKAPGFGDRRKAMLEDIAILTGGTV
ISEDLGIKLESVTLDMLGRAKKVSISKENTTIVDGSGAKSDIEGRVAQIKAQIEETTSDY
DREKLQERLAKLAGGVAVIRVGGSTEVEVKEKKDRIDDALNATRAAVQEGIVPGGGIALL
RSSTKINVKGANDDQEAGINIVRRALQSLVRQIAENAGDEASIVVGKVLDKNEDNYGYNA
QTSEFGDMISMGIVDPLKVVRTALQNAASVASLLITTEAMIAELPKKDAPAGMPGGMGGM
GGMDMM
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atggcatctaaagaaatcaagtttggtcgtaccgcgcgcgaaaagatgctgcgtggcgtc
gacattctcgccgatgcagtcaaggtaacgctcggcccgaagggccgtaacgtcatcatc
gacaagtccttcggcgctccgcgcatcaccaaggacggcgtttccgtcgccaaggaaatc
gaactcgaagacaagttcgaaaacatgggcgcccagatggtccgcgaagtcgcttcgaag
accaacgacatcgccggcgacggcaccaccactgcaaccgttcttgcccaggcgatcgtt
cgcgaaggcaacaaggccgttgcagccggcatgaacccgatggacctgaagcgcggcatc
gacctcgctgttgccgacgtcgtgaaggatctccaggccaaggccaagaagatctccacc
tctgaggaagttgcacaggtcggcacgatttcagcaaacggcgacaagcaggtcggtctc
gacattgctgaagccatgcagaaggtcggcaatgaaggcgtcatcacggttgaagaagcc
aagaccgccgaaaccgaactcgaagtcgtcgaaggcatgcagttcgaccgcggctacctc
agcccctacttcgtgaccaacccggaaaagatgatcgccgacctcgaagacgtcttcatt
ctccttcacgagaagaagctctcgaacctgcagtcgatgcttccggttctcgaagctgtc
gttcagaccggcaagccgctcctgatcatcgctgaagacgtcgaaggcgaagctcttgca
acgctcgtcgtcaacaagctgcgcggcggcctcaagatcgctgctgtcaaggcgccgggc
ttcggcgatcgccgcaaggccatgctcgaagacatcgccatcctgaccggcggcaccgtg
atctccgaagacctcggcatcaagctcgagagcgttacgctcgacatgctcggccgtgcg
aagaaggtttcgatctccaaggaaaacaccacgatcgtcgacggttcgggcgccaagtcc
gacatcgaaggccgtgttgcccagatcaaggcccagatcgaagaaaccacctccgactac
gaccgcgaaaagctgcaggaacgtcttgccaagctcgccggcggcgttgccgtcatccgc
gtcggcggctcgacggaagtcgaagtgaaggaaaagaaggaccgcatcgacgacgctctc
aacgcgacgcgcgctgccgttcaggaaggtatcgtccccggcggcggtatcgctctcctc
cgctcctccacgaagatcaacgtcaagggtgcaaacgacgaccaggaagccggcatcaac
atcgttcgccgcgccctgcagtcgctcgttcgtcagatcgctgaaaacgcaggcgacgaa
gcctcgatcgttgtcggcaaggtgctcgacaagaatgaagacaactacggctacaacgcc
cagacgtccgaattcggcgacatgatctcgatgggtatcgtcgacccgctcaaggtcgtt
cgtaccgcgctgcagaacgctgcttctgtcgcatcgctgctgatcaccaccgaagccatg
attgccgaactgccgaagaaggatgcccctgccggcatgcctggcggcatgggcggcatg
ggcggaatggacatgatgtga
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