Rhizobium hidalgonense: FFM81_019300
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Entry
FFM81_019300 CDS
T07043
Symbol
mutM
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
rhid
Rhizobium hidalgonense
Pathway
rhid03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rhid00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
FFM81_019300 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhid03400
]
FFM81_019300 (mutM)
Enzymes [BR:
rhid01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
FFM81_019300 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
FFM81_019300 (mutM)
DNA repair and recombination proteins [BR:
rhid03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
FFM81_019300 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Rv2993c-like_N
DRTGG
Motif
Other DBs
NCBI-ProteinID:
QKK25351
LinkDB
All DBs
Position
complement(3966719..3967609)
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AA seq
296 aa
AA seq
DB search
MPELPEVETVKRGLAPAMEGARIARLELRRGDLRFPFPDAFADRVSGRTIVGLGRRAKYL
LVDLDDGNTLISHLGMSGSFRVEEGGASATPGEFHHARAKDEKHDHVVFHLEGSGGPRRV
VYNDPRRFGFMDMVGRAELAGHPFFRDLGPEPTGNELGAAYLAERFRDKAQPLKSALLDQ
KNIAGLGNIYVCEALWRSHLSPIRAAGTLVTPGGRPKAQLSLLVAAIRNVIADAIAAGGS
SLRDHIQTDGSLGYFQHSFSVYDREGQACRTPGCSGTVARIVQAGRSTFYCATCQK
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atgccggaattgccagaagtcgaaacggtcaaacgcggcctggcgccggcgatggagggg
gctcgcatcgcaaggctggagctgcgccgcggcgatctgcgcttcccctttcccgacgct
ttcgccgacagggtttccggccgcaccatcgtcgggctcggtcgtcgcgccaaatatctg
ctggtcgatctcgacgacggcaatacgctgatttcccacctcggcatgtccggttctttc
cgtgtcgaggagggtggcgcctcggccacgcctggcgaattccaccatgcccgcgcaaag
gacgagaagcacgatcacgtcgtctttcatctcgaaggttcaggcggcccgcgccgcgtc
gtctataatgatccgcgccgtttcggcttcatggatatggtggggcgtgccgagctcgct
ggccatcccttcttccgcgatctcggcccggagccgaccggaaacgagcttggcgccgcc
tatctggccgaacgcttccgcgacaaggcgcagccgctgaaaagcgcgctgctcgaccag
aagaacattgccggtctcggcaatatctatgtctgcgaggcgctgtggcgctcgcatctt
tcgccgatccgggccgccggcacgctggtgacaccaggcgggcggccgaaggcacagctt
agcctgctcgtcgccgcaatccgcaacgtcatcgccgatgcaatcgccgccggcgggtcg
tcgctgcgcgaccatatccagaccgacggatcgctcggctatttccagcattccttctcc
gtctatgatcgcgaaggtcaggcttgccgcacgcccggctgcagcggtacggtcgcccgt
atcgtccaggcgggccgctccactttttactgcgccacctgccagaaatga
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