Rhizobium hidalgonense: FFM81_020465
Help
Entry
FFM81_020465 CDS
T07043
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
rhid
Rhizobium hidalgonense
Pathway
rhid03030
DNA replication
rhid03430
Mismatch repair
rhid03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rhid00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FFM81_020465
03430 Mismatch repair
FFM81_020465
03440 Homologous recombination
FFM81_020465
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rhid03032
]
FFM81_020465
03400 DNA repair and recombination proteins [BR:
rhid03400
]
FFM81_020465
Enzymes [BR:
rhid01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FFM81_020465
DNA replication proteins [BR:
rhid03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
FFM81_020465
DNA repair and recombination proteins [BR:
rhid03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
FFM81_020465
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_gamma3
DUF3646
DNA_pol3_delta2
DNAX_ATPase_lid
AAA
AAA_22
AAA_16
AAA_30
AAA_14
AAA_5
AAA_19
AAA_18
RuvB_N
AAA_24
SKI
TsaE
SRP54
AAA_assoc_2
DUF815
Rad17
AAA_2
CbiA
RNA_helicase
nSTAND3
AAA_28
ABC_tran
VapE-like_dom
Motif
Other DBs
NCBI-ProteinID:
QKK25569
LinkDB
All DBs
Position
4192526..4194403
Genome browser
AA seq
625 aa
AA seq
DB search
MSDTERQSKDAASTGTGYRVLARKYRPKDFTDLMVGQEPMVRTLTNAFETGRIAQAYMLT
GVRGVGKTTTARILARALNYKTSDIDKPTIDLRVPGEHCQAIMEGRHVDVIEMDAASHTG
IDDIREIIEQVRYRPVSARYKVYIIDEVHMLSTQAFNGLLKTLEEPPEHVKFIFATTEIR
KVPITVLSRCQRFDLRRISASDLVGLFSTIAAKEGIEAEGDALAMIARAAEGSARDGLSL
LDQAIAHGAGAVQAEAVRGMLGLADRARIVDLFQHVIKGDVAAALGEFQNQYEAGANPVV
VLTDLADFTHLVTRLKYVPDAASDPSLSEVERTKAAEFAKGVAVTTLSRIWQMLLKGIPE
TEGSSRTAGAAEMVLIRLAHAAHLPAPEDAARRLAEFSGDNAGSRPSSPPSGNGGGGTRV
PYQSSVAARAPEIATSKPQPSAPVTMLRAVPSSQPETMPVGRIETKPAEAPKPLVSVNSI
GDIVDLAAEKRDVKLKALVRNFVRPVRIEPGRLDVNLTEGAPGTLLNELAVKLKEWTGIH
WIVSTSREEGRPTMVEAETKAQQQRVSDARQDPDVAAILAQFPGAKIIDVRVRAPTPEEE
AEEATPPAAAESEDGDILPGDDLEF
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacaccgagcgacagtcaaaagatgccgcctcgacgggcaccggataccgggtg
ctggctcgcaaataccgccccaaggatttcacggacctgatggtcggccaggagccgatg
gtccgcaccctcaccaatgccttcgagaccggccgcatcgcccaggcctatatgctgacc
ggcgtacgcggcgtcggcaagacgacgacggcgcgcatcctggcgcgggcacttaactac
aagacatcagatatcgacaagccgacgatcgatctgcgcgtgcccggcgagcactgccag
gcgatcatggaaggccgccatgtcgacgtgatcgagatggatgccgcctcccataccggc
atcgacgatataagagagatcatcgagcaggtgcgctaccgcccggtttcggcgcgctac
aaggtctatatcatcgacgaagtgcacatgctgtcgacgcaggccttcaacggcctgctg
aagacgctggaagagccgccggagcatgtgaagttcatcttcgccaccaccgaaattcgc
aaggtgccgatcaccgtgctgtcgcgctgccagcgcttcgatctgcgccgcatcagcgcg
tcggatctcgtcgggctgttttcgacgatcgccgccaaggaaggcatcgaggcggaaggc
gacgcgctggcgatgatcgcgcgcgccgccgaaggatcggcacgcgacggcctgtcgctg
ctcgaccaggcgatcgcccatggcgcaggcgccgtgcaggctgaggccgtgcgaggcatg
ctcggcctggccgaccgcgcccggatcgtcgatctcttccagcatgtcatcaagggcgat
gtcgccgctgccctcggcgaattccagaaccagtacgaggccggcgccaatccggtggtg
gtgctgaccgatctcgccgatttcacccatctggtgacacggctgaaatatgtgccggat
gcggcaagcgacccttcgctcagcgaagtcgagcgcaccaaggcggcggaattcgccaag
ggcgtcgcggtcacgacgctgtcgcgcatctggcagatgctgctgaagggcattccggaa
acggaaggctcgtcgcggacggcgggtgctgccgaaatggtgctgatccggcttgcgcat
gcggcgcatctgccggcgcctgaggacgcggcacggcggcttgccgaattttccggcgac
aatgccggctcgcggccctcctcgccgccttccggcaatggcggcggcggcacgcgtgtt
ccctatcaaagcagtgtcgcggcgcgcgcgcctgaaatcgcgacgagcaagccgcagcct
tcggcgcccgtaacgatgctgcgcgccgtgccgagcagccagcccgagacgatgcctgtc
gggcggatcgagacgaagccggccgaagcaccgaagccgctcgtatcggtcaattcgatc
ggcgatatcgtcgatcttgccgccgagaagcgggacgtcaagctgaaggcgctggtgcgc
aacttcgtgcggcccgtgcgcatcgaacccggccggcttgatgtgaacctcaccgagggc
gcgccaggcacgctgctgaatgaacttgccgtcaagctcaaggaatggacgggcatccac
tggatcgtcagcaccagccgcgaggaaggccggccgacgatggtggaggcggaaaccaag
gctcagcaacagcgcgtcagcgatgcacgccaggaccctgatgtcgcggcgatccttgcg
caatttccaggcgccaagatcattgacgtgcgcgtcagggcgccgacgccggaggaggaa
gcggaagaggcgacaccgccagccgccgccgaatcggaagacggtgatatcctgcccggc
gacgacctagaattctga
DBGET
integrated database retrieval system
