Rhizobium hidalgonense: FFM81_020530
Help
Entry
FFM81_020530 CDS
T07043
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
rhid
Rhizobium hidalgonense
Brite
KEGG Orthology (KO) [BR:
rhid00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rhid03016
]
FFM81_020530 (truB)
Enzymes [BR:
rhid01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
FFM81_020530 (truB)
Transfer RNA biogenesis [BR:
rhid03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
FFM81_020530 (truB)
Prokaryotic type
FFM81_020530 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
TruB_C
Zf-C2H2_ZNF451_5th
Motif
Other DBs
NCBI-ProteinID:
QKK25580
LinkDB
All DBs
Position
4207182..4208114
Genome browser
AA seq
310 aa
AA seq
DB search
MSKPRKPKGRPISGWLILDKPVDFGSTEAVSKIKWLYKAQKAGHAGTLDPLASGMLPIAL
GDATKTVPYVMDGRKIYEFTVSWGEERATDDLEGEVTESSDKRPSEQQIRDILPGYIGTI
SQVPPQFSAIKISGERAYDLAREGETVEIPSREVEIFRLTLLACPDANTAHFEVECGKGT
YVRALARDFGRELGCYGHVSGLRRTFVAPFAEEAMVPLANLVALEALEDMDERLAALDAL
LIDTCEALSALPHLVINDDQAHRLKMGNPILVRGRDAPVAESEAYATARGRLIAIGEIGE
GEFRPKRVFG
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaaccacgcaaacccaagggccggccgatttccggctggctgatcctcgacaag
ccggtggatttcggctcgacggaagccgtttccaagatcaagtggctctacaaggcgcaa
aaggccggccatgccggcacgctcgacccgctcgcctccggcatgctgccgatcgcgctc
ggcgatgcgacgaagaccgttccctatgtgatggacggccgcaagatctatgaattcacc
gtcagctggggcgaggagcgcgccacggacgatctcgagggcgaagtgaccgaaagctcg
gacaagcgcccgagcgaacagcagatccgcgatatcctgcctggatatatcggcaccatc
agccaggtgccgccgcagttttcggcgatcaaaatatcgggtgaacgcgcctatgatctg
gcgcgtgaaggcgaaaccgtcgaaatcccctcgcgcgaagtcgaaatcttccggctgaca
ttgctcgcctgcccggatgccaataccgcgcatttcgaagtggaatgcggcaagggcact
tatgtcagggcgctggcgcgcgattttggccgggagctcggctgctacggccacgtgtcc
gggttgcggcgcaccttcgtcgcgccctttgcggaagaggccatggtgccgctcgccaac
ctcgtggcgctggaggcgctcgaagatatggacgagcggcttgccgccctcgacgcgctg
ctgatcgatacctgcgaggcgctatcggccctgccccatctcgtcatcaatgacgaccag
gcgcaccggctgaagatgggcaacccgatcctcgtgcgggggcgcgatgcgccggttgcc
gaaagcgaagcctatgcgacggctcgcggccggctgatcgcgatcggcgagatcggcgag
ggcgaatttcgcccgaagcgggttttcggctga
DBGET
integrated database retrieval system
