Rhizobium hidalgonense: FFM81_020995
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Entry
FFM81_020995 CDS
T07043
Symbol
addB
Name
(GenBank) double-strand break repair protein AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
rhid
Rhizobium hidalgonense
Brite
KEGG Orthology (KO) [BR:
rhid00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhid03400
]
FFM81_020995 (addB)
Enzymes [BR:
rhid01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FFM81_020995 (addB)
DNA repair and recombination proteins [BR:
rhid03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
FFM81_020995 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
QKK25663
LinkDB
All DBs
Position
4312375..4315569
Genome browser
AA seq
1064 aa
AA seq
DB search
MAERHQPRILTIPAGLSFLKTLATTLCDGRLTPLFRHETDDPLSLSRVTIYLPTRRAVRV
LRSEFVDLLGGRSAILPVIRPLGETDDDSGYFDEALPATIDLAQPLSNTARLLELARLIL
AWRNKLPEIVRHIHSDSPLVAPASPADAIWLARNLAELIDSIETEDIDWSELSKLDTGDY
AAWWQLTAEFLQIASAFWPERLSELGKSSPARHRNAILRAEASRLSATKTTGPIIIAGST
GSVPATADLIAAVAHMPEGVIVLPGLDLSMPEKDWQMVAPEPAPGQLANPASRSHPQYGL
SSLLKRLKLTRAEVTALDRPEPDLDRRAEILSRALVPAEATSDWGAWKNALPEGAFTSAF
ADVSLIEAANEREEATAIAIALRLALERPGQDGESRAALITPDRNLARRVMADLSRFGIL
ADDSAGTPLAATPQGTLLQLLLEATLRPGDPVAIVSLLKHPLARFGLERDALISATRALE
MLALRGGVAEVDISRLESLLTHQLAEQAEDRHAPQWRKALAPDAAEAAYDLARRVTQATE
PLASALMRHRPEDRGRTASFTLSDWAERTGRSLEAVAVDPHGNLADLWSDEAGDALAALL
SEVIDTNGQMEADGPQWIDIMAALAAGHAVKPRALSHPRLFIFGTLEARLQSVNTLILGG
LNEGTWPGQTANNPFIPRMMKTEIGLEPPERRIGQLAHDFEMANGTRHLIYSRALRQGST
PTVASRWLQRLLALAGEAFEAELKGRGNRFLRWAGLIDRGEAQAPAQRPSPKPPLVLQPK
SYSFSEVGRLRRDPYAIYARRILRLDPVDPFNRDPGAAERGTLYHTIIDRFIREAHVAGT
PDAAAAMERILSELFDMERLPPHIDAVWRPRFRAVARAFLDWEAGRRPGIRKTLTEVRGG
VELEAINIRLNGVADRIDVTGPNAADIIDYKTGYNPSPTQARVLLDPQLALEAAALSAGA
FRDAGSLVPQDLLYVRLRPGRRFLVDTVNNESSARSDKAKSAMDLAEESIDQLVKFVSLL
QSGEKGFTSRLIPAQQFDFGGDYDHLARVSEWSTAETEEGGGDE
NT seq
3195 nt
NT seq
+upstream
nt +downstream
nt
atggcggagcggcaccagccacgcattctgacgatcccggcgggcctctccttcctgaaa
acgctggcaacgacgctttgcgacggccggctcacgccgctcttccggcatgagaccgat
gatccgctgtcgctgtcccgggtgacgatctacctgccgacgcggcgcgccgtgcgtgtg
ttgcgctcggaattcgtcgacctgctcggcggccgctcggcgatcctgcctgttattcgt
cctctcggcgaaaccgacgacgacagcggctatttcgacgaggcactgccggcaacgatc
gatctcgcccagccgctgtcgaataccgcccgactgctggagcttgcgcgactgatcctt
gcctggcggaacaaactgccggagatcgtccgccacattcattcggactcgccgctggtc
gccccagccagcccggcggatgcgatctggctcgcccgcaacctcgcggagctgatcgat
tccatcgaaaccgaagacatcgactggtcggaactgtcgaaactcgacaccggcgactat
gccgcctggtggcagctgacggcggaattcctccagatcgccagcgccttctggccggag
cggctttccgaactcggcaaatcctcgccggcgcggcaccgaaacgccattctccgggcc
gaagcatccaggctttcggcgacgaaaaccaccgggccgatcatcattgccggttcgaca
ggttcggttcccgccaccgccgatctgattgccgctgtcgcccatatgcctgaaggggtg
atcgtgcttccgggcctcgatctctccatgcccgagaaagactggcagatggtcgcgccg
gaaccggcacccggccagcttgccaatcctgcaagccggagtcatccgcaatatggcctg
tcatcgctgctgaagcggctgaaactcacacgtgccgaggtgacggccctcgacaggccg
gagcccgaccttgaccggcgcgccgaaatcctgtctcgggcgctcgtcccggcggaggcg
accagcgattggggtgcgtggaagaacgcgctgccggagggtgcgttcacgtcagccttc
gccgatgtttcgctgatcgaagccgccaacgagcgcgaagaagcaacagcgattgccatc
gcgctccggctggcactggaaagaccggggcaggacggcgaaagccgggcggcgctcatc
acgccggaccgcaatctcgcccggcgggtgatggccgacctttcccgcttcggcattctc
gccgacgattcggcagggacaccgcttgcggccacgccgcagggcacgctcctgcaattg
ctgctggaggcaacgctacgcccgggcgatcccgtggcaatcgtctcgctgctcaaacat
ccgctggcccgtttcggcctggaacgcgacgcgttgatttcggcgacccgggcgctcgag
atgctggcgctgcgcggcggcgtggcggaggtggatatcagcaggctcgagtcgctgctg
acccatcagcttgccgaacaggctgaggacaggcacgcgccgcaatggcgaaaggcgctt
gcgcctgacgcagccgaggcggcatacgaccttgcccgccgggtcacgcaagcaaccgaa
cctctggcttcggccttgatgcggcaccggccggaagatcgtgggaggaccgcgagtttc
accttgtccgattgggcggagcgaaccggccggtcgcttgaagcggtggcggtcgatccg
cacggcaatctcgccgatctctggtctgatgaagccggcgatgcccttgccgccctgctc
agcgaagtgatcgacaccaacggccagatggaggccgacgggccgcaatggatcgacatc
atggcagcccttgccgccggtcatgcggtgaagccgcgggcgctcagccatccccgcctc
ttcatcttcggcacgctggaagcccgcctgcagagcgtcaacaccctcatcctcggcggc
ctgaacgagggcacctggccggggcagaccgccaacaatcccttcattccgcgcatgatg
aagacggagatcggcctcgaaccgccggagcggcgcatcggccagctggcgcatgacttc
gaaatggcaaacggcacgcgtcatctgatctattccagagcgctacgccagggctcgacg
ccgacggtcgcctcgcgctggctgcagcgactgctggcgcttgccggagaggcgttcgaa
gcggaattgaagggacgcggcaaccgcttccttcgatgggccgggctgatcgatcgcgga
gaggcccaggccccggcacagcgaccctcgccgaaacccccgttggtactgcagccaaaa
tcctattccttcagcgaggtcggccggctgcgccgcgacccctacgccatctatgcccgc
cgcatcctgcggctcgatcccgtcgatccgttcaaccgcgatccgggcgcggccgaacgc
ggcacgctctaccacacgatcatcgaccggttcattcgcgaggcccatgtcgccggcact
ccggatgcggcagcggcgatggagcgcattctttccgagcttttcgacatggagcggctg
ccgccgcatatcgatgccgtgtggcggccacgctttcgcgcggtggcccgcgccttcctc
gactgggaggccggacggcggcccggcatccgcaagacgctgacagaagtgcggggcggc
gtcgaactggaagcaatcaatatccggctcaacggcgttgccgaccggattgacgtcacc
ggaccgaacgccgccgatatcatcgactacaagaccggttacaatccctcgccgacgcag
gcacgcgtgcttctcgatccgcagctcgcgctcgaagcggcggccctgagcgccggcgcc
ttccgtgatgccggcagtctggtgccgcaggacctgctctatgtgcgcctgcggccggga
cgccgttttctggtcgacaccgtcaacaatgagagttcggcgcgcagtgacaaggcgaaa
tcggcgatggatctcgccgaggaatcgatcgatcagctggtcaagttcgtgagcttgctg
caatccggcgagaaaggctttacctcgcggctcatcccggcacagcaattcgatttcggc
ggcgattatgatcatctcgcccgcgtctccgaatggtcgacagccgagaccgaggagggc
ggcggcgatgagtga
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