Rhizobium hidalgonense: FFM81_021105
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Entry
FFM81_021105 CDS
T07043
Symbol
dnaQ
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
rhid
Rhizobium hidalgonense
Pathway
rhid03030
DNA replication
rhid03430
Mismatch repair
rhid03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rhid00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FFM81_021105 (dnaQ)
03430 Mismatch repair
FFM81_021105 (dnaQ)
03440 Homologous recombination
FFM81_021105 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rhid03032
]
FFM81_021105 (dnaQ)
03400 DNA repair and recombination proteins [BR:
rhid03400
]
FFM81_021105 (dnaQ)
Enzymes [BR:
rhid01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FFM81_021105 (dnaQ)
DNA replication proteins [BR:
rhid03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
FFM81_021105 (dnaQ)
DNA repair and recombination proteins [BR:
rhid03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
FFM81_021105 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
QKK25685
LinkDB
All DBs
Position
complement(4336430..4337152)
Genome browser
AA seq
240 aa
AA seq
DB search
MREIIFDTETTGLDNRADRIIEIGGIELFNHFPTGNVIHIFINPGDQKVHPDALAVHGIT
DEFLKDKKPFADVAEEILAFFGDAKWIAHNATFDMGFINAEFARIGLPPILPERVVDTLS
MARRKHPMGPNSLDALCRRYGIDNSHRTKHGALLDSELLAEVYIEMIGGRQAAFGLSMTA
TSGQNGRGDGAEQEDVVIASVLERPRPLAPRLSQSEAQAHEALVAKLGEKGIWAKYASLN
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgaaatcatcttcgatacggaaaccactggcctcgacaaccgcgccgaccgcatc
atcgaaatcggcggcatcgagctcttcaaccatttcccgacaggcaacgtcattcatatc
ttcatcaatcccggcgatcagaaggttcatccggatgcgcttgccgtgcacgggatcacc
gatgagttcctgaaggacaaaaagcctttcgccgatgtcgccgaagaaatccttgctttc
ttcggtgatgcgaagtggatcgcccacaacgccacgttcgacatgggcttcatcaacgcc
gaattcgcgcggatcggtttaccgccaatcctgccggagcgggtggtcgataccctgtcg
atggcgcggcgcaaacatccgatggggccgaattcgctcgacgcgctctgccggcgttac
ggcatcgataattcgcaccgcaccaaacacggcgcgctgctcgactccgaactgctcgcc
gaagtctatatcgagatgatcggcggcaggcaggcagctttcggcctgagcatgaccgcc
acatcaggtcagaacggtcgcggcgacggggcggagcaagaggatgtggtaattgcatcc
gtgctcgagcggccccgcccgcttgccccgcgcctcagccagtccgaggcgcaggcgcac
gaggcgctcgtggccaagctcggtgaaaaaggcatctgggcgaaatacgccagcctcaat
taa
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