Rhizobium hidalgonense: FFM81_023550
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Entry
FFM81_023550 CDS
T07043
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
rhid
Rhizobium hidalgonense
Pathway
rhid02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rhid00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
FFM81_023550
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rhid02000
]
FFM81_023550
Transporters [BR:
rhid02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
FFM81_023550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
QKK26347
LinkDB
All DBs
Position
pPR19E01:complement(473512..475449)
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AA seq
645 aa
AA seq
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MPNEILSRGVTRRAVLGGMAGAAALSIAGRAFAAGGEAPALAQLVKDGKLPPLAERLPKK
PMVVKPFEKVGTYGGSLRRGLRGSSDHNGILRMVGNQSLVRWNLEFTAVEPNLAERWEVS
DDATQFTFHLIEGVRWSDGHPFTADDVVFAIEDCVKNTELYSATPAQLAVAGKPVTVEKI
DDHTVKFTFAAANALYLENLATPLGQHPTLFPKHYCSQFLPKYNPNIEADAKKAGVTSWT
ELFRSRCGDIEIPSRWGNVDKPTLDPWVVKEPYAGGATRVVMTRNPYFWQVDTEGNQLPY
IDEINFGISQDVESLMLNVISGKIDIQERHISVLANKPTLSKNMEKGDYRLLTLVPSASQ
QCQIYFNITHKDPAMRKMFADKSFRQALSIGINRPELIDIVYFGQSEPYQAGPRPTHPWY
NEKYARQFTEYDADKAGAMLDQAGYKKGGDGFRVRPDGQKVFFSIDVIPTLYPDLVDALE
LVKTHWAQIGIDMKVNTIERALYYTRGDDNAHDAQVWPGPGGLDPMLDPRDFFAFHPQGS
RYAIPWTLWYTSNGARGEEPPESQKKRMKLFDEARSTADLDKRGAVMKQIFDIAAEEFET
VGLCLAVGGFGIIRNNLRNVPEKEPDSWSWPNPGPALPQQFTFTS
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atgcctaatgaaattctgtcgcgcggcgttacccgccgcgccgtgcttggcggcatggcc
ggtgcagcggcattgtccatcgcgggccgcgctttcgccgcaggcggcgaagcacccgca
cttgcgcagcttgtgaaagatggaaaactgccgccgctcgccgagcgcctgccgaagaag
ccgatggtcgtcaagccattcgaaaaagtcggtacctatggcggctctctgcgccgcggc
cttcgcggttcatccgaccataacggcattctgcgcatggttggcaaccagagcctcgtg
cgctggaacctcgaatttaccgctgtggagccgaaccttgccgagcgctgggaagtcagc
gacgatgcgacacaattcaccttccatctgatcgaaggcgtgcgctggtcggacggtcat
ccctttaccgcagatgacgtcgttttcgcgatcgaagactgcgtcaaaaacaccgagctc
tacagcgcaaccccggcgcagcttgctgtcgccggcaagccggttaccgtcgagaagatc
gacgatcatacggtgaagttcacctttgctgcggccaacgcgctttatctggaaaacctc
gccacgccgcttggccagcatccgacgctctttccgaagcactattgcagccagttcctg
ccgaaatataatcccaatatcgaggctgatgcgaagaaagccggcgtcacaagctggacg
gagctgttccgcagccgttgcggcgacatcgagatcccgtcacgatggggcaatgtcgac
aagccgacgctggatccatgggtggtcaaggagccctatgccggcggcgcgacgcgtgtc
gtcatgacgcgaaatccttatttctggcaggtcgataccgagggcaatcagcttccttat
atcgatgagatcaacttcggcatctcgcaggacgtcgaatcgctcatgctgaatgtcatc
tcgggcaagatcgacatccaggagcgccatatcagcgtgcttgccaacaagccgacgctg
tccaagaacatggaaaaaggcgattatcgtctgctgacgcttgtgccttcggcctcgcag
cagtgccagatctacttcaatatcacccacaaagatcctgccatgcgcaagatgtttgcg
gataaatcgttccggcaggcgctgtcgatcggcatcaatcgcccggagctcatcgatatc
gtctatttcgggcagagcgagccctatcaggccggaccgcgtccgacccatccctggtac
aacgagaaatatgcgcgccagttcaccgaatatgacgccgacaaagcgggcgcgatgctc
gatcaggccggctacaagaaaggcggcgacgggtttcgcgtccgaccggacggccagaag
gtcttcttctcgatcgacgtcattccgacgctctatcccgacctcgtcgacgcgctcgaa
ctggtcaagacgcattgggcccagatcggcatcgacatgaaggtcaacaccatcgaacgg
gcgctttattacacccgcggcgacgacaatgcccacgatgcgcaggtatggccggggcct
ggcggtctcgatccgatgctcgatccgcgcgatttcttcgccttccatccgcagggttcg
cgttacgccattccgtggacgctgtggtacacctccaacggtgcacgcggcgaagaaccc
ccggaaagccagaagaagcgtatgaagctcttcgacgaggcgcgttcgacggccgatctc
gacaagcgcggtgcggtcatgaagcagatattcgatatcgccgcggaggaattcgagacc
gtcgggctttgccttgccgtcggcggcttcggcatcatccgcaacaacctgcgcaatgtt
cccgaaaaggagccggacagctggtcctggcccaatccggggcctgcactgccgcagcag
ttcacttttacgagctga
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