KEGG   Rhizobium hidalgonense: FFM81_024750
Entry
FFM81_024750      CDS       T07043                                 
Symbol
tssH
Name
(GenBank) type VI secretion system ATPase TssH
  KO
K11907  type VI secretion system protein VasG
Organism
rhid  Rhizobium hidalgonense
Pathway
rhid03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:rhid00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    FFM81_024750 (tssH)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:rhid02044]
    FFM81_024750 (tssH)
Secretion system [BR:rhid02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   FFM81_024750 (tssH)
SSDB
Motif
Pfam: AAA_2 AAA_lid_9 AAA AAA_5 AAA_16 ClpB_D2-small Sigma54_activat AAA_22 Clp_N NACHT AAA_25 nSTAND3 AAA_7 Zeta_toxin TniB AAA_18 IstB_IS21 SRP54 Torsin NBD_SMAX1
Other DBs
NCBI-ProteinID: QKK26558
LinkDB
Position
pPR19E01:complement(741910..744672)
AA seq 920 aa
MSHIDLNRMIRTLEPNLRVGLETAASLAVRHQHGVVDIAHWLRSLLDIAKFSAVFEELGV
SSAALRTELDAAIADIPREDGAALALSPNLLALGRESFLVASLQCGRNIVLLADLLAALL
NDPALRALIRGIAPSLRNLDRAMLDRLLETAAPGPAEQLSVAATPAGDNEFLRLYTRDMT
ADARAGRTDPVIGRDRELRQVIDILMRRRQNNPILVGEAGVGKTAVAEALALDIAGGNVP
SRLKDVKLLLLDLSLLQAGAGVKGEFERRLHGVVDAVKTSPQPIILFIDEAHGLIGAGGQ
AGQGDAANILKPALARGELRTIAATTWGEYKRFIEKDAALTRRFQTVHVREPDEEAAIRM
LRGVAEGLKTHHKVRIRDEAIVAAVRLSARYLPDRQLPDKAISLIDTAAAAVALARQTTP
EALKLLTDERDLLETEANWLAREPETPEKNDRLGEIAGKQQEIVFEIEALRSKFDEENRL
VREADRLEEFFSPDDAVVPLAPAEHAGDGTNVAPFPSQAMTAESARAALAVTERSLAAVA
DQTPLLPRVVDKEIVAAVVARWTGIPLGKLLADQIETVKTLDIRLKERVLGQDAAIERIA
SAMRAARAGLSDPRRPPAVFLLVGMSGTGKTETALSLAEMLYGGSRYLTTINMSEFKEEH
KISMLLGSPPGYVGYGEGGVLTEAVRRRPYGVLLLDEIDKAHPGVQQIFYQVFDKGTLRD
GEGRDIDFKNTTIVMTANTGSEMIAALSADPETMPEPDALEALLLPELQKHFKPAFLGRT
TVLPFMPLGTDTLSGIVDIQIGRIRERVAATYGTTLSLSPEARDALISRARTSEMGARAI
EVMIARDLLPDLSTFFLDAVAAGKKITGIAIGYDGHRFGLDAEEAAPQEFDTPGENRLSD
EVTPSRKRTRGAGRRKATTP
NT seq 2763 nt   +upstreamnt  +downstreamnt
atgtcccatatcgatctcaatcgtatgataagaacgcttgagcccaatttacgtgtcggt
cttgagacagcggcttcgcttgccgtgcgccatcagcacggcgttgtggacatcgcccat
tggctgcgctcccttcttgatattgcgaagttttcggccgttttcgaagagctaggtgtg
tcctccgcggcgctgaggacggagctcgacgcggccatcgccgacatcccgcgagaggat
ggcgctgcgctggcgctctcgcccaacctgcttgcccttggccgggaatcatttctggtt
gcatcgctgcaatgcgggcgcaatatcgtgcttctcgccgatctgcttgccgcgttgctg
aacgatccggcattgcgcgccctaatccgcggcatcgctccgtcgctgcgcaacctcgac
agagcgatgctcgacaggttgctggagacggcagcgcccggtccagcagaacagctttcc
gtggccgccacgccggccggagacaacgagttcctgcggctctacacccgcgacatgacc
gcggacgcccgcgccggccgcaccgacccggtcatcggccgcgatcgcgagctacggcag
gtgatcgatatcctgatgcgccggcggcagaacaatccgatcctcgtcggtgaggcgggc
gtcggcaagactgcggtcgccgaagcactggcgctggatatcgccggcggcaatgtgccg
tcccggctgaaggacgtgaagctgctgctcctggatctcagcttgctgcaggcaggcgcc
ggcgtcaaaggcgagttcgaaaggcggctgcatggtgtcgtcgatgcggtgaagacctcg
ccgcaaccgatcattctgttcatcgatgaggcgcatgggctgatcggcgctggcggacag
gcagggcagggcgatgccgccaatatcttgaagccggctttggcgcggggcgaattgagg
acgatcgcggcgacgacctggggcgaatacaaacgtttcatcgaaaaggacgcggccctg
acccgtcgcttccagaccgtgcatgtccgtgaaccggacgaagaagctgcgatccgcatg
ctgcgcggcgttgcggaaggcctgaaaacccatcacaaggtccgcatccgcgacgaggcg
attgtcgccgccgtccggctctcggcgcgatatctgccggaccggcagcttcccgacaag
gcaatcagcctgatcgacacggctgccgccgccgttgcgctggcacgccagacgacgccg
gaggcgctgaagctgctgaccgacgagcgcgatcttctggaaaccgaggcgaactggctc
gcccgcgaaccggagacgccggaaaagaacgatcggcttggcgagatcgccggcaaacag
caggagatcgtcttcgagatcgaggcgctgcggtcgaaattcgacgaagaaaaccggctc
gtccgtgaggccgaccggctggaggagttcttctcgcccgacgacgccgtcgttccactg
gcgccggccgagcacgcaggcgacggcacgaatgtggcgccttttccatcgcaggctatg
actgccgagagcgcacgcgcggcactggcggtgacggagcggagtctcgcggccgtggcg
gatcaaacacccctgctgccgcgcgtcgtcgacaaggagatcgttgccgccgtcgttgcc
cgctggaccggaatccccctgggcaagctgctcgccgaccagatcgagaccgtcaagacg
ctcgatatcaggctgaaggagagggtgctcggccaggacgcggcgatcgagcggatcgct
tcggccatgcgggcggcccgcgccgggctgtccgatccgcgccggccgccggccgtcttc
ctgctggtcggcatgtccggcaccggcaagaccgaaaccgcgctttcgctcgccgagatg
ctctatggcggcagccgctacctcacgaccatcaacatgtccgagttcaaggaggagcat
aagatttccatgctgctcggctcgccccccggttatgtcggctacggcgaaggcggcgtg
ctgacggaagcggtacggcgcaggccctatggcgtgctgctgctcgacgagatcgacaag
gcgcatccgggcgttcagcaaatcttctatcaggtgttcgacaagggaacgctgcgcgat
ggcgaaggccgggacatcgatttcaagaacaccaccatcgtcatgacggcgaataccggc
tcggagatgatcgccgcgctttccgccgatcccgagacgatgccggaaccggacgcactc
gaagcgctgctgctgccggaattgcagaagcatttcaagccggccttccttggccgcacg
acggtgctgcccttcatgccgctcggaaccgacacgctgtcgggcatcgtcgatatccag
atcggccgcatccgcgaacgggttgccgccacttacgggacgacgctttcactgtcgccg
gaagcccgcgacgcgctgatttcgcgcgcccgcaccagcgagatgggcgcccgcgcgatc
gaggtgatgatcgcgcgcgacctcttgcccgatctttcgacatttttcctcgatgccgtg
gcagcgggcaagaaaattacggggattgccatcggatatgatggccaccgcttcggcctc
gatgccgaagaggctgcccctcaggaattcgacacgccgggggaaaaccggttgtcggat
gaagtaaccccgagccgcaagcgcactcggggagcaggaagaagaaaggcaactacgcct
tag

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