KEGG   Rhizobium hidalgonense: FFM81_026815
Entry
FFM81_026815      CDS       T07043                                 
Name
(GenBank) Ku protein
  KO
K10979  DNA end-binding protein Ku
Organism
rhid  Rhizobium hidalgonense
Pathway
rhid03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:rhid00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    FFM81_026815
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rhid03400]
    FFM81_026815
DNA repair and recombination proteins [BR:rhid03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     FFM81_026815
SSDB
Motif
Pfam: Ku DUF4265
Other DBs
NCBI-ProteinID: QKK26896
LinkDB
Position
pPR19E01:complement(1171302..1172210)
AA seq 302 aa
MATGHRAQWKGFIKFGEVSCGVALYTAASTSERITFNTINKASGNRVNRVFIDSETEDPV
PKEQQTKGFEIENGQYIIIDPEEVAATIPESNKTLEIEAFIPCSDVDDVYFDKPYYLTPD
KMGGDAYAALRDAMKKSDVVAIAHTVLFRRMRTVLIRPHGKGLIATTMNYDYEVRSSKKA
FEEIPKLKIEGEMLDLAKHIIGTKKGTFDPATFDDRYEAALADLVKAKIEGKALPKPKKV
EVSKPNDLLAALRESAGLMKAAVDKPKRTAANANQGTGRQRATRGPASKATASGTAPRRK
AS
NT seq 909 nt   +upstreamnt  +downstreamnt
atggcaacagggcatcgcgcgcagtggaagggcttcattaaattcggtgaagtctcctgc
ggagtagcgctttatacggcggcaagcacgtcagagcgcattacgttcaacacgatcaac
aaggcatccgggaacagggtgaaccgcgtcttcatcgacagcgagactgaggacccggtt
ccgaaggagcaacagacaaagggcttcgagatcgagaatggccagtacatcattatcgat
cccgaagaggtcgccgcgacaatcccggaaagcaacaagacgctggagatcgaagccttc
attccctgctcagatgtggacgacgtctacttcgacaagccgtactacctgacccccgac
aagatgggcggcgacgcctacgcagctctgcgcgacgccatgaagaagtcggacgtcgtc
gccatagcgcacaccgttctcttccgccggatgcggaccgtgctgatcaggccgcatggc
aaaggcctcatcgcgacgacaatgaactatgactacgaggtgcgctcgtcgaagaaggcc
ttcgaggaaattcccaagctgaagatcgagggggagatgctcgatctcgcaaagcacatc
atcggcaccaagaagggaaccttcgaccccgcgaccttcgacgatcgctatgaagccgct
ctcgccgacctggtcaaggcaaagatcgagggcaaggcgttgccgaagcctaagaaggtc
gaagtgtcgaagccgaacgatcttctagccgccctccgcgaaagtgcagggctgatgaag
gcggccgtggacaagccgaaacgcaccgccgcaaatgccaatcagggcaccggccgacag
cgtgccacacgcgggccagcttcgaaagccaccgcttctggaactgcaccacgtcgcaag
gcaagctga

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