Rhizobium hidalgonense: FFM81_028140
Help
Entry
FFM81_028140 CDS
T07043
Name
(GenBank) DUF4082 domain-containing protein
Organism
rhid
Rhizobium hidalgonense
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4082
DMFA2_C
He_PIG
Cadherin_4
Big_9
Mo-co_dimer
PKD
Motif
Other DBs
NCBI-ProteinID:
QKK27114
LinkDB
All DBs
Position
pPR19E01:complement(1458792..1465121)
Genome browser
AA seq
2109 aa
AA seq
DB search
MYRNARRWTARSLLVDSLIPQWLTIGGKERPRKPAEKHGDSAQLAAAVKIATGNNQALID
DSHKDATLNERDVGQKEGGNGVADGRADDRLVAPPLPDAFTINRELGARSGDIAASVKAG
HTPGFVHFAPDAGRVAFGAASSLPRSYGEMSSIGDDPLAPYLPQSPAPTGSGQDSATIGA
ERSHSGKVVILESTPSAQSTAHHAGPNALAVGMPFGVCGCGYYTSPTRILDWAHGSGLLQ
QDGQLPGTKFTDGPDYVSTIKKAIGASVSDPLLDRDVSSFAGWRATADLTNLALSNGSLP
GGGEIGTGTGTKGKAVLSGSVTTPPQPSAQRSLATQDLAAAAAASNAIVLENQKQGNPES
EWGIDTASTNIEGFATDISVDNGKTISFKINTNSTNYRIDIYRLGYYGGMGARKVTTIQH
TGLQTQPNPLRNATTGTEDAGNWAVSASWAVPDDAVSGVYIAKLVRQDGTFGENQIPFIV
RDDASHSDVVFQTADETWQAYNGWGGANFYGGNGPATGQGAGRAYALSYNRPIATRDGVG
TYAGPQDYLFGAEYAGIYWLEQNGYDVSYMSGIDVDRYGSLLLNHKTYIDAGHDEYWSGQ
QRTNVEAARDAGVNLMFWSGNEVYWRTRWGNAYSADGTPYRTLISYKETWGPPGTSLDPS
NEWTGTFRDPRLSPPAIGGGSPENSLTGQLFKVDDVGGNLAAIKVGYDDANLRFWRNTSV
ANLQPGQTATLTKNYLGYEWDEAPDNGFDPAGLVKLSSTTLPVTTYLLDYGNTTGSATAT
HNLTLYRAPSGALVFGAGTVYWTWGLSNNHDNEATPTDPRVQQAMVNLLADMGVQPGTLQ
SGLTAATGSTDAVAPTSVITVPATVAANSTVTISGTAADTGGGVIASVEVSTDNGASWHP
ATGDENWTYSWTPAIAGTYTIRSRAVDDSINLETPSAGRTVTVTGPTFTSLFGGATPAVV
NTDDAAAVELGVKFQSSVAGTVSGIRFYKSSLDTGTHTGSLWSSTGTRLATLTFTNETAS
GWQSATFTSPVTLTAGQTYTASYHTNVGNYSTTANYFLSNVTSGPLTAPASGNGVYRYGN
SAFPTSSFDQTNYWVDVMFNPSNANNTTPTAVADTGNATEKGGVANGSGGVVASGNVLTN
DTDPDSGDTKTVSAVSFGATSGTLGSALNGTYGSLVLSASGTYSYTINESNTAVQALRLS
TNTVNDVFSYTMRDTAGATSTANLTVTIHGANDAPVLAVQTATQNATVGSAFSFVVPTTT
FSDVDSGETLTYAATAADGTALPSWLTFNASTRTFSGTPTAGGSYGVRVTATDIGGLAAN
ETFNIAVSVPGNTTPTAVADTGDATEKGGVANGSGGVVASGNVLTNDTDPDSGDTKTVSA
VSFGATSGTLGSALNGTYGSLVLSASGTYSYTINESNTAVQALRLSTNTVNDVFSYTMRD
TAGATSTANLTVTIHGANDAPVLAVQTATQNATLGSAFSYTLPTATFSDVDSGETLTYSA
TAADGTALPSWLAFNASTRTFSGTPTTAGNYGVKVTATDIGGLSTNETFTIAAAAGATTY
SLFSASSTPAQTNLNDGQQLELGVKFTSTVGGDITGIRFYRSANDNGQNVVDLWSSTGTK
LASATFTNTTASGWQTANFTTPFTIAANTTYVASYHTTGAYVATANFFTAAVTSGPLTAT
ATGNGVYRYGGSATAGIFPNSTFSATNYWADVVFRPTNTNNATPTAVADAGDATEKGGVA
NGSGGVVASGNVLTNDTDPDSGDTKTVSAVSFGATSGTLGSALNGTYGSLVLSASGTYSY
TINESNGAVQGLRLSTNTLNDVFSYTMRDTAGATSTANLTVTIHGANDAPVLAVQTATQN
ATLGSAFSYTLPTATFSDVDSGETLTYSATAADGTALPSWLAFNASTRTFSGTPTTAGNY
GVKVTATDIGGLAANETFTIAAGTAPATYSLFSASSTPTQTNLNDGQQLELGVKFTSNVG
GDITGIRFYRSANDNGQNVVDLWSSTGTKLATATFTNTTASGWQTANFTTPFTIAANTTY
VASYHTTGGYVASNAFFTAAVTNGPLTAPASGNGLYAYGGSATAGLFPTSTFNSANYYAD
VVFRPQLAA
NT seq
6330 nt
NT seq
+upstream
nt +downstream
nt
atgtatcgcaacgctcgtcgctggactgcgcgctcactcctggtggattcgctgattccc
caatggctgactatcggagggaaggaaaggccacgcaagccggccgaaaagcacggggac
agtgctcaactcgcggcagcggtgaaaatcgcgactggaaacaatcaggcccttatcgac
gattcccataaggacgcgacgcttaacgagcgtgacgttggacagaaagagggcgggaac
ggcgtcgcggacggccgggccgacgataggctcgtagcgccgcccttgcctgacgctttc
acaatcaatcgcgaactgggggcgcgaagcggcgatatcgctgcgtctgtgaaggccggc
catacgccgggtttcgtacatttcgcgccggatgcgggcagggttgcgttcggggccgca
tcgtctcttccgcgtagctacggcgaaatgagctccataggcgacgaccccctggctccg
tatttgccgcaaagccctgcgccgacaggttcggggcaagattctgcgaccattggggcc
gagcgttctcactcgggcaaggtcgtcattctcgaatcgacgccctcagcgcagtcgact
gcgcatcatgctgggccgaatgcgctggcggttggcatgccctttggagtgtgcggatgc
ggctactatacctcccccacgcggattctcgattgggcccatggcagcggcctgcttcag
caggacggtcagttgccggggaccaaatttaccgacgggccggactatgtgtcgacgatc
aagaaggccatcggcgcctcggtcagtgatcctctgctcgatcgtgacgtatcttcgttc
gcgggctggcgcgcaaccgcagacctgacgaacttggcgctctccaacggatcattgccc
ggcggcggagagataggaacgggaaccggcaccaagggtaaagccgtcctttccggctcg
gtgacgacgccacctcaaccttctgcgcagcggtcgctggcaacgcaagatctggcggcc
gccgcggcggcgagcaacgcgatcgtgctggaaaaccagaagcagggcaatccggagagc
gagtggggcatcgacaccgccagcaccaacatcgagggttttgcgaccgatatcagcgtc
gacaacggcaagacgatcagcttcaagatcaatacgaattctaccaactatcggatcgat
atctatcggctcggctactatggcggcatgggtgcccgcaaggtcacgaccatacagcat
accggattgcagacgcagcccaatccgctgcgcaatgccacgaccggcacggaggatgcc
ggcaactgggcggtctcggcgtcctgggccgtaccggacgatgccgtctcaggcgtctac
atcgccaagctcgtgcgtcaggacggcaccttcggcgaaaatcaaatcccgttcattgtg
cgcgatgacgccagccatagcgacgtcgtctttcagaccgcagacgagacctggcaagct
tacaacggctggggtggcgcaaacttctatggcggcaacggcccggcgacggggcagggg
gcaggccgcgcctatgcactcagctacaacaggccgattgcaacccgcgacggagtcggc
acctatgccggcccgcaggactatctgttcggcgccgaatatgcaggcatctactggctg
gaacaaaacggttatgatgtctcctatatgtcaggcatcgacgtcgatcgctatggcagt
ctgctactcaatcacaagacctatatcgatgccgggcacgacgaatattggtcgggacag
cagaggaccaatgtcgaagccgcacgcgatgcgggcgtcaacctgatgttctggagcggt
aacgaggtctattggcgtacccgctggggcaatgcctacagcgccgacggaacaccttat
cgcaccctgatctcctacaaggagacatggggaccgcctggcaccagcctcgatccttcc
aacgaatggacaggcaccttccgcgacccgcgcctcagcccgcctgctatcggcggcggc
agccctgagaactcgctgactggccaattattcaaggtcgacgatgttggcggcaatctc
gccgcgattaaggttggctatgatgatgccaacctgcgcttctggcgcaatacgagcgtc
gcaaacctccagcccggccagacggcaacgctcaccaagaattatcttggttacgagtgg
gacgaggcgcctgacaacggcttcgatccggccgggctcgtcaagctgtcgtcgacgacg
ctgcccgtcaccacctacttgctcgattacggaaatacgaccggcagtgcgacggcgact
cacaatctgaccctctaccgcgcccccagcggggcactggtgttcggtgccggtacggtc
tattggacatggggcctgagcaacaatcacgataacgaggcgacccccaccgatcctcgc
gtccagcaggcgatggtcaatctgcttgccgatatgggcgttcagccggggacgctacaa
tccgggcttaccgcggcgactggttccaccgatgctgttgctccgacctccgtcatcacg
gtgccagcgacggtggccgctaattcaaccgtgacgatttcaggcaccgctgccgatacg
ggcggcggggtcatcgccagcgtcgaggtttcgaccgacaatggtgcgagttggcatccg
gcgacgggcgacgagaactggacctactcatggaccccggcgattgcagggacctatacg
atccggtcgcgggcggtggacgacagcatcaatctcgagacaccttcggcggggcgcacg
gtcaccgtcaccggcccgacttttacatctctcttcggtggcgcgacgcccgcggtcgtc
aacaccgacgatgctgccgccgtcgagctcggagtcaaattccagtcatccgtggcgggc
acggtcagcggtatccggttttacaagagcagcctggatacgggcacacataccgggtcg
ctctggtcaagcacgggtacgcggcttgcgaccctcaccttcactaacgagactgccagc
ggctggcagagtgcgactttcacgagcccggtgactttgacagccggacagacctatacc
gcatcctaccatacgaatgtcggcaactattcgacgaccgccaactacttcctgtccaat
gtgacgagtggtccgctgacggcgccggcaagcggcaacggcgtctaccgctatggcaat
agcgcgttcccgacgagcagcttcgaccagacgaactattgggtcgatgtgatgttcaat
ccctcgaatgcgaacaacacgacaccgacggcggtcgccgatacggggaatgcgaccgag
aagggcggtgtcgccaatggttcgggcggcgtggttgccagcggcaacgtgctgaccaac
gacaccgatccggattccggcgataccaagacggtgagcgccgtcagcttcggcgcgacc
tcaggcacgctcggctcagcgctgaacggcacctatggcagtctcgttctcagtgcatcg
ggcacctatagctatacgatcaacgagagcaataccgccgtgcaggcgctgcgcctgtcg
accaacaccgtgaacgacgtcttcagctatacgatgcgtgataccgccggggccacctcc
acggcaaatctgaccgtcaccatccatggcgccaacgacgcaccggtgctcgccgtccag
acggcgacgcaaaatgccaccgtcggctcggccttctccttcgtcgtgccgacgaccacc
ttcagcgatgtcgacagcggcgaaacgctgacctacgcggcaacggccgccgacggcacg
gcgcttcccagctggctgaccttcaacgcctcgacgcgcaccttctccggcacgccgacg
gcgggcgggagctacggcgtcagggtcacggcaaccgatatcggcggccttgccgccaac
gagaccttcaacatcgccgtgtcggttcccggcaacacgaccccgacggcagtcgccgat
acaggggatgcgaccgagaagggcggtgtcgccaatggttcgggcggcgtggttgcgagc
ggcaacgtgctgaccaacgacaccgatccggattccggcgataccaagacggtgagcgcc
gtcagcttcggcgcgacgtcaggcacgctcggctcagcgctgaacggcacctatggcagt
ctcgttctcagtgcatcgggcacctatagctatacgatcaacgagagcaataccgccgtg
caggcgctgcgcctgtcgaccaacaccgtgaacgacgtcttcagctatacgatgcgtgat
accgccggggccacctccacggcaaatctgaccgtcaccatccatggcgccaatgacgcg
ccggtgctcgccgtccagacggcgacgcagaatgccaccctcggctcggccttctcctac
acgctgccgacggcgaccttcagcgatgtcgacagcggcgagacgctgacctattcggca
acggccgccgacggcacggcgcttcccagctggctcgccttcaacgcctcgacgcgcacc
ttctccggcacgccgacgacagcaggcaactatggcgtcaaggttacggcaaccgatatc
ggcggtctctcgaccaacgagactttcactatcgccgctgcggcgggggcaacgacctac
agcctgttctccgcctccagcacgccggcccagacgaacctcaacgatggccagcagctc
gagctcggcgtcaagttcacgtcgaccgtcggcggcgacattaccgggatcaggttctac
cgcagcgccaacgacaacggccagaacgtcgtcgacctgtggagctcgacgggcaccaaa
cttgccagcgccaccttcaccaacaccacggcaagcggctggcagacggcgaacttcacg
acgcccttcaccattgccgccaacacgacctatgtcgcctcctaccacacgacaggcgcc
tatgtggcgactgctaatttcttcaccgccgccgttaccagcgggccgctgacggcaaca
gccaccggcaacggcgtttaccgctatggcggctccgccaccgctggcattttcccgaac
tccacttttagcgccaccaattactgggccgacgtggtcttccgtcccacgaatacgaac
aacgcgacgccgacggcggttgccgatgcgggggatgcgaccgagaagggcggggtggcc
aatggttcgggcggcgtggttgccagcggcaacgtgctgaccaacgacaccgatccggat
tccggcgacaccaagacggtgagcgcagtcagcttcggcgcgacgtcgggcacgctcggc
tcagcgctgaacggtacctatggcagtctcgttctcagtgcatcgggcacctatagctat
acgatcaacgagagcaatggcgccgtgcaggggctgcgcctctcgaccaacacgctgaac
gatgtcttcagctatacgatgcgtgataccgccggggctacctccacggcaaacctcacc
gtcaccatccatggtgccaatgacgcgccggtgctcgccgtccagacggcgacgcagaat
gccaccctcggctcggccttctcctacacgctgccgacggcgaccttcagcgatgtcgac
agcggcgagacgctgacctattcggcaacggccgccgacggcacggcgcttcccagctgg
ctcgccttcaacgcctcgacgcgcaccttctccggcacgccgacgacagcaggcaattat
ggcgtcaaggtcacggcaaccgatattggcggtcttgcggccaacgagactttcactatc
gctgccgggacggcgccagcgacctacagcctgttttctgcctccagcacgccgacccag
acgaacctcaatgatggccagcagctcgagctcggcgtcaagttcacgtcgaacgtcggc
ggcgatattaccggcatcaggttctaccgcagcgccaacgacaacggccagaacgtcgtc
gacctatggagctcgacgggcaccaagcttgccacggccaccttcaccaacaccacggca
agcggctggcagacggcgaacttcacgacccccttcaccattgccgccaacacgacctat
gtcgcctcgtatcacacgacaggcggctacgtggcaagcaacgccttcttcaccgccgcc
gtcacgaacggtccgctgacggcgccggccagcggcaatggcctctatgcctatggcggc
tctgccaccgcaggcctcttcccgaccagcactttcaattcagcgaattactatgccgac
gtggtcttccggccgcagcttgccgcgtga
DBGET
integrated database retrieval system
