Rhizobium hidalgonense: FFM81_030015
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Entry
FFM81_030015 CDS
T07043
Name
(GenBank) sigma 54-interacting transcriptional regulator
KO
K14414
transcriptional regulatory protein RtcR
Organism
rhid
Rhizobium hidalgonense
Brite
KEGG Orthology (KO) [BR:
rhid00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rhid03000
]
FFM81_030015
Transcription factors [BR:
rhid03000
]
Prokaryotic type
Other transcription factors
Others
FFM81_030015
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Paralog
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GFIT
Motif
Pfam:
RtcR
Sigma54_activat
Sigma54_activ_2
AAA
AAA_5
Mg_chelatase
AAA_16
AAA_22
RuvB_N
MCM
NACHT
NTPase_1
AAA_7
ATPase_2
AAA_19
T2SSE
AAA_14
AAA_18
TsaE
AAA_30
AAA_33
AAA_2
ABC_tran
AAA_29
CARF_Card1
Motif
Other DBs
NCBI-ProteinID:
QKK27568
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All DBs
Position
pPR19E02:complement(248597..250204)
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AA seq
535 aa
AA seq
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MKRRVAISILGTTLDAGKWENRWSRWRPNVALCQQPGLFIDRLELILDNHSQALCHRIVA
DIETVAPATEVRSNIINFKDPWDFSEVYTNLRDFARNYSFDPETEDYLVNITTGTHVAQI
CWFLLTEARIIPGQLLQLSPPRDREPEQDFAGTHRIIDLDLSRYDEIAKRFASEREDAAS
FLKSGISTRNAAFNRMIDQIERVVIRSAAPVLLTGPTGAGKSQLARRIYELKKSQRKVSG
PFIEVNCATLRGDQAMSTLFGHVKGAFTGAAGERAGLLKSADKGVLFLDEIGELGLDEQA
MCLRAIEEKKFLPVGADREASAEFQLIAGTNRDLGEDVRKGRFREDLYARLNLWTFQLPA
LRERKEDIEPNLDFELRRYLEREGENVTFNKEARDRYLTFATGPQAVWSANFRDLSASVT
RMATLAPHGRITTDVVDDEVRRLNAFWRSSSDGDRVDLIIEDVLGAEAAASLDRFDAAQL
ATVLYTCRQHATASAAGRALFAMSRLEKKSSNDADRLSKYLARFSLRFEDIRKAG
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgccgcgttgccatcagcatattgggaaccacgctcgatgcggggaaatgggaa
aatcgctggagccgctggcggccgaatgtcgcgctctgccagcaaccgggcctgttcatc
gaccggctggaactgatcctcgacaaccactcgcaagctctctgtcaccgcattgtcgcc
gacatcgaaactgtggcgccggcaacggaggtgcggagcaacatcatcaacttcaaggac
ccctgggatttttcggaggtctataccaacctcagggactttgcccgcaactacagcttc
gaccccgaaacggaagactatctcgtcaacatcaccaccggcacccatgtcgcacagatc
tgctggttcctgctgaccgaagcccgcatcattcctggccagctgctgcagctctcgccg
ccgcgcgatcgcgagccggagcaggactttgccggcacgcatcggatcatcgacctcgac
ctttcccgttatgacgagatcgccaagcgcttcgcttccgagcgggaagacgccgcctct
ttcctgaaatcggggatttcgacccgcaacgccgccttcaacagaatgatcgaccagatc
gagagggtggtgatccgctcggcggcgcccgttctgctgaccgggccgaccggtgccggc
aagtcgcaactcgcccgcaggatctacgagctgaagaagagccagcgcaaggtcagtggt
cccttcatcgaggtcaactgcgcgacgctgcgcggcgaccaggccatgtccactctgttc
ggccatgtgaagggggcgtttaccggcgccgcaggcgagcgtgccggcctgctcaaatcc
gccgacaaaggcgtgctgttcctcgacgagatcggcgaactcggccttgacgaacaggcc
atgtgcctgcgggcgatcgaggaaaagaagttcctgcccgtgggcgccgatcgggaggcc
tccgcggagtttcagctgattgccggcaccaatcgcgatcttggcgaggatgtccgcaaa
ggcaggttccgcgaagatctctatgcccgcctgaacctctggactttccagctgccggcc
ctgcgcgagcgcaaggaggacatagagcccaatctcgacttcgagctcaggcgctatctg
gaacgagaaggcgaaaatgtgaccttcaacaaggaggcacgcgaccgctacctgaccttc
gcaactggcccgcaagccgtctggagcgccaactttcgcgacctgtcggcgtcggtgacg
cgcatggcgacccttgcgccgcatgggcgcatcacaaccgacgtcgttgacgatgaagtc
cggcggctgaatgcgttttggcgcagctcaagtgacggcgacagggtggatctcatcatt
gaagacgtgctgggtgcggaggctgctgccagcctcgatcgcttcgacgcagcccagctt
gccaccgttctctacacctgccgtcaacatgccacggcaagtgccgcgggcagagccctg
tttgcgatgtcgcgactggagaaaaagagcagcaacgacgccgatcgcctgagtaaatat
ctcgcgcgcttcagcctcagattcgaggacatcaggaaagccggatag
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