Rhinolophus hipposideros (lesser horseshoe bat): 308488828
Help
Entry
308488828 CDS
T12007
Symbol
CLTC
Name
(RefSeq) clathrin heavy chain 1 isoform 1
KO
K04646
clathrin heavy chain
Organism
rhii Rhinolophus hipposideros (lesser horseshoe bat)
Pathway
rhii04142
Lysosome biogenesis
rhii04144
Endocytosis
rhii04721
Synaptic vesicle cycle
rhii04961
Endocrine and other factor-regulated calcium reabsorption
rhii05016
Huntington disease
rhii05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
rhii00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
308488828 (CLTC)
04142 Lysosome biogenesis
308488828 (CLTC)
09150 Organismal Systems
09155 Excretory system
04961 Endocrine and other factor-regulated calcium reabsorption
308488828 (CLTC)
09156 Nervous system
04721 Synaptic vesicle cycle
308488828 (CLTC)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
308488828 (CLTC)
09164 Neurodegenerative disease
05016 Huntington disease
308488828 (CLTC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rhii04131
]
308488828 (CLTC)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rhii04147
]
308488828 (CLTC)
Membrane trafficking [BR:
rhii04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
308488828 (CLTC)
Exosome [BR:
rhii04147
]
Exosomal proteins
Proteins found in most exosomes
308488828 (CLTC)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
TPR_Vps41
TPR_1
Ig_TRAPPC10_3rd
Motif
Other DBs
NCBI-GeneID:
308488828
NCBI-ProteinID:
XP_080885150
LinkDB
All DBs
Position
20:complement(24985444..25049795)
Genome browser
AA seq
1682 aa
AA seq
DB search
MAQILPIRFQEHLQLQNLGINPANIGFSTLTMESDKFICIREKVGEQAQVVIIDMNDPSN
PIRRPISADSAIMNPASKVIALKAGKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTVA
LVTDNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGA
MQLYSVDRKVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGN
QPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISG
ETIFVTAPHEATAGIIGVNRKGQVLSVCVEEENIIPYITNVLQNPDLALRMAVRNNLAGA
EELFARKFNALFAQGNYSEAAKVAANAPKGILRTPDTIRRFQSVPAQPGQTSPLLQYFGI
LLDQGQLNKYESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGDLVKSVDPTLALSVYL
RANVPNKVIQCFAETGQVQKIVLYAKKVGYTPDWIFLLRNVMRISPDQGQQFAQMLVQDE
EPLADITQIVDVFMEYNLIQQCTAFLLDALKNNRPSEGPLQTRLLEMNLMHAPQVADAIL
GNQMFTHYDRAHIAQLCEKAGLLQRALEHFTDLYDIKRAVVHTHLLNPEWLVNYFGSLSV
EDSLECLRAMLSANIRQNLQICVQVASKYHEQLSTQSLIELFESFKSFEGLFYFLGSIVN
FSQDPDVHFKYIQAACKTGQIKEVERICRESNCYDPERVKNFLKEAKLTDQLPLIIVCDR
FDFVHDLVLYLYRNNLQKYIEIYVQKVNPSRLPVVIGGLLDVDCSEDVIKNLILVVRGQF
STDELVAEVEKRNRLKLLLPWLEARIHEGCEEPATHNALAKIYIDSNNNPERFLRENPYY
DSRVVGKYCEKRDPHLACVAYERGQCDQELINVCNENSLFKSLSRYLVRRKDPELWGSVL
LESNPYRRPLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELIELLEKIVLDNSVFSE
HRNLQNLLILTAIKADRTRVMEYINRLDNYDAPDIANIAISNELFEEAFAIFRKFDVNTS
AVQVLIEHIGNLDRAYEFAERCNEPAVWSQLAKAQLQKGMVKEAIDSYIKADDPSSYMEV
VQAANTSGNWEELVKYLQMARKKARESYVETELIFALAKTNRLAELEEFINGPNNAHIQQ
VGDRCYDEKMYDAAKLLYNNVSNFGRLASTLVHLGEYQAAVDGARKANSTRTWKEVCFAC
VDGKEFRLAQMCGLHIVVHADELEELINYYQDRGYFEELITMLEAALGLERAHMGMFTEL
AILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQAHLWAELVFLYDKYEEYDNAIITMMN
HPTDAWKEGQFKDIITKVANVELYYRAIQFYLEFKPLLLNDLLMVLSPRLDHTRAVNYFS
KVKQLPLVKPYLRSVQNHNNKSVNESLNNLFITEEDYQALRTSIDAYDNFDNISLAQRLE
KHELIEFRRIAAYLFKGNNRWKQSVELCKKDSLYKDAMQYASESKDTELAEELLQWFLQE
EKRECFGACLFTCYDLLRPDVVLETAWRHNIMDFAMPYFIQVMKEYLTKVDAIKEKVDKL
DASESLRKEEEQATETQPIVYGQPQLMLTAGPSVAVPPQAPFGYGYTAPPYGQPQPGFGY
SM
NT seq
5049 nt
NT seq
+upstream
nt +downstream
nt
atggcccagattctgccaattcgttttcaggagcatcttcagctccagaacctgggtata
aacccagcaaacattggctttagtaccctgactatggagtcagacaaattcatctgcatt
agagagaaagtaggagagcaggcccaggtggtaatcattgatatgaatgatccaagtaat
ccaattcgaagaccaatttcagcagacagcgccatcatgaatccagctagcaaagtaatt
gccctgaaagctgggaaaactcttcagatatttaacattgaaatgaagagtaaaatgaag
gcccataccatgactgatgatgtcaccttctggaaatggatctccttgaataccgttgct
cttgttacggataatgcagtttaccattggagtatggaaggagagtctcagccagtgaaa
atgtttgatcgccattctagccttgcaggttgccagattatcaattaccgcacagatgca
aagcagaagtggttactgctcactggcatatctgcacagcaaaatcgtgtggtgggagct
atgcagttatattctgtagataggaaagtgtctcagcccattgaaggacatgccgctagc
ttcgcacagtttaaaatggaaggaaatgcagaagaatcaacgttattttgttttgcagta
cgaggtcaagctggagggaagttacatatcattgaagttggcacacctcccacagggaac
cagccctttccaaagaaggcagtggatgttttctttcctccagaagcacaaaatgacttt
cctgttgcaatgcagatcagtgagaagcatgatgtagtgttcctgattactaagtatggt
tatatccacctctatgaccttgagaccggtacctgcatctacatgaatagaatcagtgga
gaaactatctttgtcactgcgcctcatgaagccacagctggaataattggagtaaataga
aaaggacaagttctgtcagtatgtgtggaagaagaaaacattattccgtacatcaccaat
gtcttacaaaatcctgatttggctctgagaatggctgtacgtaacaacttagctggtgct
gaagaactctttgcccggaaatttaatgctctctttgcccagggaaattactcagaagca
gcaaaggtggctgctaatgcaccaaagggaatccttcgtaccccagacaccatccgtcgg
ttccagagtgtcccagcccagccaggtcaaacttctcctctacttcaatattttggaatc
cttttggaccaaggccaactaaacaaatatgaatccttagaactatgtaggcctgtactt
cagcaagggcggaaacagcttttggagaaatggttaaaagaagataagctggaatgttct
gaagaactgggtgaccttgtgaaatctgtggaccctacattggcacttagtgtgtaccta
agggctaatgtcccaaataaagtcattcagtgctttgcagaaacaggtcaagttcagaag
attgttttatatgctaaaaaagttggatatactccagactggatctttctgctgagaaac
gtcatgcgtatcagtccagatcagggacaacaatttgctcagatgttagttcaggatgaa
gaacctcttgctgatatcacacagattgtggatgtctttatggaatataatctaattcag
cagtgtactgcctttttgcttgatgccctgaagaataaccgcccatctgaaggtccttta
cagactcggctgcttgagatgaacttgatgcatgcgcctcaggttgcggatgctattcta
gggaatcagatgttcacgcattacgaccgggctcatattgctcagctgtgtgaaaaggct
ggcctcctgcagcgtgcattagaacacttcactgatttatatgatataaagcgtgcggtt
gttcacacccatcttcttaaccccgagtggttagtgaattattttggatccttatcagta
gaagactccctagaatgcctccgggccatgctgtctgccaatattcgtcagaatctgcag
atctgtgttcaagtggcttctaagtatcatgaacaactgtcaactcagtctctgattgaa
ctttttgaatctttcaagagttttgaaggtctcttttattttctgggatccattgttaac
tttagtcaggacccagatgtgcactttaaatatattcaggcagcttgtaagactggacag
atcaaagaagtagaaagaatctgcagagaaagcaactgctatgatcctgagcgagtcaag
aattttctcaaggaagcgaagttaacagatcagttaccactcatcattgtgtgtgatcga
ttcgactttgtccatgatttggtgctctacttatatagaaataatcttcaaaagtatata
gagatatatgtacagaaggtgaatccaagtcgacttcctgtagttattggaggattactt
gatgttgattgctctgaagatgtcattaaaaacttgattcttgttgtaagaggtcaattc
tctactgatgaacttgttgctgaggttgaaaaaagaaacagattgaaactgcttctgcct
tggctagaggccagaattcatgagggctgtgaagagcctgctactcacaatgcgttagcc
aaaatctacatagacagtaacaacaacccagagagatttcttcgtgaaaatccttactat
gacagtcgtgttgttggaaagtattgtgagaagagagatccacatctggcctgtgttgct
tatgaacgtggccagtgtgatcaggaacttattaatgtttgtaatgagaattccctcttc
aaaagtctttcccgctacctggtgcgccgaaaggatccagaattgtggggcagtgtgctg
ctggaaagcaacccttacaggagaccactaattgaccaggttgtacaaactgccttgtct
gagactcaggaccctgaggaagtgtcagtgactgtcaaggcttttatgactgcagacctt
cctaatgaactcattgaactgctggagaaaattgtccttgataactctgtattcagtgaa
cacaggaatctgcagaacctcctcatcctcactgcaatcaaggctgaccgtacccgtgtt
atggaatatattaaccgcctggataattatgatgccccagatattgccaacattgccatc
agcaacgagctgtttgaggaagcatttgccattttccggaaatttgatgttaacacttca
gcagtgcaggtcttaattgaacatattggaaatttggatcgggcatatgagtttgctgaa
cgctgcaatgaacctgcagtctggagtcaacttgcgaaagcccagttgcagaaaggaatg
gtgaaagaagccattgattcttacatcaaagcagatgatccttcgtcctacatggaagtt
gttcaggctgccaatactagtggaaactgggaagaactggtaaagtacttgcagatggcc
cgtaagaaggctcgtgagtcctatgtggagacagaattgatatttgctctggctaaaaca
aaccgccttgcagagttagaagaattcatcaatgggccaaataatgctcatatccaacaa
gttggtgaccgttgttatgatgaaaaaatgtatgatgctgctaagttgttatacaataat
gtttccaattttggacgcttggcatctaccctggttcacctgggtgaatatcaggcagcc
gttgatggagctaggaaagctaacagcactcgaacgtggaaagaggtctgctttgcctgt
gtagatgggaaagaattccgtctcgctcagatgtgtggacttcatattgtagtacatgca
gatgagttggaggaacttatcaactactatcaggatcgtggctattttgaagaactgata
accatgttggaagcagcactgggacttgaacgagctcatatggggatgtttactgaatta
gccattctatattctaaatttaagccacagaaaatgcgggagcatctggagcttttctgg
tccagagtgaatattcctaaggtgctaagagctgcagaacaagctcatctttgggcagaa
ttggtatttttgtatgacaagtatgaagaatatgataatgccataattaccatgatgaat
catccaactgatgcatggaaagaagggcagttcaaagacatcattaccaaggttgccaat
gtggaactatactacagagcaatacagttctacttagaattcaagcctctgttgttaaat
gatttgctgatggtgctgtctccacggttggatcatactcgtgcagtcaattatttcagc
aaggttaaacagctaccactggtgaaaccatatttgcgttcagttcagaaccacaacaac
aaatctgtaaacgagtcactgaacaacctctttattacagaagaagattatcaggctctg
cggacatcaatagatgcctatgacaactttgacaatatctcgcttgctcagcgtttggaa
aaacatgaactcatcgagttcagaagaattgctgcttatctcttcaaaggcaacaatcgc
tggaaacagagtgttgagctgtgcaagaaagatagcctgtacaaggatgctatgcagtac
gcctctgaatctaaagatactgagttggctgaagaactcctacagtggtttttgcaggaa
gaaaaaagagagtgctttggagcttgtctctttacctgttatgatcttttaaggccagat
gttgtcctggaaactgcctggaggcacaatatcatggattttgccatgccctatttcatc
caggttatgaaggaatacttgacaaaggttgatgcaataaaggaaaaggtggacaaatta
gatgcttcagaatcactgagaaaagaagaagaacaagctacagagacgcaacctattgtt
tatggtcagccccagttgatgctgacagcaggacccagtgttgcagtccctccccaggca
ccttttggctatggttacactgcaccaccctatgggcagccacagcctggctttgggtac
agcatgtga
DBGET
integrated database retrieval system
