Rhinolophus hipposideros (lesser horseshoe bat): 308491183
Help
Entry
308491183 CDS
T12007
Symbol
SS18L1
Name
(RefSeq) calcium-responsive transactivator isoform 1
KO
K15623
protein SSXT
Organism
rhii Rhinolophus hipposideros (lesser horseshoe bat)
Pathway
rhii03082
ATP-dependent chromatin remodeling
rhii05202
Transcriptional misregulation in cancer
Brite
KEGG Orthology (KO) [BR:
rhii00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
308491183 (SS18L1)
09160 Human Diseases
09161 Cancer: overview
05202 Transcriptional misregulation in cancer
308491183 (SS18L1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rhii03036
]
308491183 (SS18L1)
Chromosome and associated proteins [BR:
rhii03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
308491183 (SS18L1)
GBAF(ncBAF) complex
308491183 (SS18L1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SSXT
Motif
Other DBs
NCBI-GeneID:
308491183
NCBI-ProteinID:
XP_080890357
LinkDB
All DBs
Position
22:complement(1337112..1357171)
Genome browser
AA seq
402 aa
AA seq
DB search
MSVAFASARPRGKGEVTQQTIQKMLDENHHLIQCILDYQSKGKTAECTQYQQILHRNLVY
LATIADSNQNMQSLLPAPPTQNMNLGPGALSQSGSGQGLHSQGSLSDAIGSGLPPASLMQ
GQIGNGPNHVPMQQTAQSTLPTASMSVSGSGHGSGPGYSHSGPASQSVPLQGQGAISNYV
SRANINMQSNPVSMMHQQAASSHYNSAQGGTQHYQGQSSIAMMGPSGQGGSVMGQRPMAP
YRPSQQGSSQQYLGQEDYYGGEQYGHSQATSEPLSQQYYPDGHGDYAYQQSYTEQTYDRS
FEESTQHYYEGGNSQYSQQQAGYQQGTAPQQAGYQQQYPNQQGYPGQQQGYGPAQGAPSQ
YSSYQQGQGQQYGSYRASQTGPSAQQQRPYGYEQGQYGNYQQ
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtggccttcgcgtccgcccggccgcgaggcaaaggagaggtcacgcagcaaacc
atccagaagatgctagacgagaaccaccacctgattcagtgcatcctggactaccagagc
aagggcaagactgccgagtgcacgcagtaccagcagattctgcaccggaacctggtctac
ctggccacaatcgcggactccaaccagaacatgcagtctctgctccctgccccgcccacc
cagaacatgaacctcggccccggagcactgtcccagagcggctccggccagggcctgcac
tcccaaggcagcctcagtgatgccatcggctcgggcctgcccccggcctccctcatgcag
ggtcagatcggcaacggcccaaaccacgtgcccatgcagcagacggcacagagcacgctg
cccactgcctccatgagcgtgtcaggcagcggccatggctcggggcccggctacagccac
tcgggccccgcctcgcagagtgtgcccctgcagggccaaggggccatcagcaactacgtg
tcacgtgccaacatcaacatgcagtccaacccagtgtccatgatgcaccagcaggcagcc
tcgtcccactacaactcagcgcagggcgggacgcagcactaccagggccagtcgtccatc
gccatgatgggcccgagcgggcaggggggcagcgtgatggggcagcggcccatggcaccc
taccggccctcccagcaaggctcgtcccagcagtacctgggccaggaggactactacggc
ggtgagcagtacggccacagccaggccacctcggagcctctgagccagcagtactaccct
gacggacatggcgattacgcctaccagcagtcctacacggagcagacctacgaccgctcc
ttcgaggagtccacgcagcactactacgaggggggaaactcccagtacagccagcagcaa
gcggggtaccagcagggcacagcccctcagcaggcagggtaccagcagcagtaccccaac
cagcagggatacccgggccagcagcaaggctacgggccagcccagggagctccctcgcag
tactccagctaccagcagggacaagggcaacagtacggaagctacagagcgtctcagacg
ggcccgtccgcgcagcagcagcggccttacggctacgagcagggccaatatggaaattac
cagcagtaa
DBGET
integrated database retrieval system
