Rhinolophus hipposideros (lesser horseshoe bat): 308491617
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Entry
308491617 CDS
T12007
Symbol
ARID1B
Name
(RefSeq) AT-rich interactive domain-containing protein 1B isoform 1
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
rhii Rhinolophus hipposideros (lesser horseshoe bat)
Pathway
rhii03082
ATP-dependent chromatin remodeling
rhii04714
Thermogenesis
rhii05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
rhii00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
308491617 (ARID1B)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
308491617 (ARID1B)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
308491617 (ARID1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rhii03000
]
308491617 (ARID1B)
03021 Transcription machinery [BR:
rhii03021
]
308491617 (ARID1B)
03036 Chromosome and associated proteins [BR:
rhii03036
]
308491617 (ARID1B)
Transcription factors [BR:
rhii03000
]
Eukaryotic type
Helix-turn-helix
ARID
308491617 (ARID1B)
Transcription machinery [BR:
rhii03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
308491617 (ARID1B)
Chromosome and associated proteins [BR:
rhii03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
308491617 (ARID1B)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BAF250_C
ARID
PFF1_TM
Motif
Other DBs
NCBI-GeneID:
308491617
NCBI-ProteinID:
XP_080891593
LinkDB
All DBs
Position
3:complement(9209480..9605910)
Genome browser
AA seq
2365 aa
AA seq
DB search
MAHNSSAAAAAASTNSAKSGGSEAALKEGGSAAALSSSSSAASSSSSSSGPSSAMETGLL
PNHKLKTVGEAPSAPPHQQHHQHHHAHHQHHHAHHLHHHHHALQQQLNQFQQQQQQQQQQ
QQQQQQQQQQQQQQQHPISSNSSLGNAGGGGAQPGPDMEQPQHGGAKDSAAGSQADPPGQ
PLLSKPGDEDDAPPKMGEPACGRYEHPGLGTLGAQPPPVAVPGGGGGGPAAVSEFNNYYG
SAAPASGGPGGRAGPCFDQHGGQQSPGMGMMHSASAAAGAPNSMDPLQNSHEGYPNSQYN
HYPGYSRPGAGGGGGGGGGGGGGSGGGGGGGGGGGAGAGAGAVAAAAAAAAAAAAAGGGG
GGGGGYGGSSSGYGVLSSPRQQGGGMMMGPGGGGAASLSKAAAGAAAGGFQRFAGQNQHP
SGATPTLNQLLTSPSPMMRSYGGSYPDYSSPSAPPPPPSQPQSQAAAAGAAAGGQQAAAG
MGLGKDLGAQYAAASPAWAAAQQRSHPAMSPGTPGPAMGRSQGNPMDPMVMKRPQLYGMG
SNPHSQPQQSSPYPGGSYGPPGPQRYPIGIQGRTPGAMGGMQYPQQQMPPQYGQQGVSGY
CQQGQQPYYNQQPQPPHLPPQAQYLPSQSQQRYQPQQDLSQEGYGTRSQPPLAPGKPNHE
DLNLIQQERPSSLPNTVVYVEAESSSLVEVLTSEDTAFGLKDLSGSIDDLPTGTEAALSS
AVSASGSTSSQGDQSNPAQSPFSPHASPHLSSIPGGPSPSPVGSPVGSNQSRSGPISPAS
IPGSQMPPQPPGSQSESSSHPALSQSPMPQERGFMAGTQRNPQMSQYGPQQTGPSMSPHP
SPGGQMHPGISSFQQSNSSGTYGPQMSQYGPQGNYSRPPTYTGVPSASYSGPGPGMGINA
NNQMHGQGPSQPCGAVPLGRMPSAGMQNRPFPGNMSSMTPSSPGMSQQGGPGMGPPMPTV
NRKAQEAAAAVMQAAANSAQSRPPHIRSPAYPSQSGAGGRPMFSSQHPNYGNSQAPMMHQ
PDQYGQGSFPGMNQSGLMASSSPYSQPMNNNSGLMNTQAPPYSMTPNMVNSSTASMGLAD
MMSPGESKLPLPLKADGKEEGTPQPESKAKDSYSSQGISQPPTPGNLPVPSPMSPSSASI
SSFHGDESDSISSPGWPKTPSSPKSSSSTTTGEKITKVYELGNEPERKLWVDRYLTFMEE
RGSPVTSLPAVGKKPLDLFRLYVCVKEIGGLAQVNKNKKWRELATNLNVGTSSSAASSLK
KQYIQYLFAFECKIERGEEPPPEVFSTGETKKQPKLQPPSPANSGSLQGPQTPQSTGSNS
MAEVPGDLKPPTPASTPHGQMTPMQGGRSSTVSVHDPFSDASDASFPKRNSMTPSAPYQQ
GISMPDVMGRMPYEPNKDPFGGMRKVPGSSEPFMTQGQMAGSSMQDMYNQSSSGAMSSLG
MGQRQQFPYGTSYDRRHEPYGQQYPGQGPASGQPPYAGHQPGLYPQQPNYRRHMDGMYGP
PAKRHEGDMYNVQYGSQQQEVYNQYGSSYSGPERRPIQGQYPYPYTRERMQGPGQIQPHA
LPPMMGAPMPSSSGEGPPQSMWATRNDMPYPYQNRQGPGGPAQAPPYPGMSRTDDMMVPD
QRINHESQWPSHVSQRQPYMTSSAPMQPITRPPQASYQTPPSLPNHISRAPSPASFQRSL
ESRMSPSKSPFLPSMKMQKVMPSVPTSQVAGPPPQPPPIRREITFPPGSVEASQPVLKQR
RKITSKDIVTPEAWRVMMSLKSGLLAESTWALDTINILLYDDSTVATFNLSQLSGFLELL
VEYFRKCLIDIFGILMEYEVGDPSQKALDHNAMTRSDSQSLADDSGKEDEDAECIEEEDE
DEDEEEDSRKADTEERSSTALTPPEATADPKEKPRQASKFDKLPIKIVKKNNLFVVDRSD
KLGRVQEFSSGLLHWQLGGGDTTEHIQTHFESKMEIPPRRRPPPPLSSTGRKKEQEGKGD
SEEQQEKSIIATIDDVLSARPGALPEDANPGAPAESSKFPFGIHQAKSHRNIRLLEDEPR
SRDETPLCTIAHWQDSLAKRCICVSNIVRSLSFVPGNDAEMSKHPGLVLILGKLILLHHQ
HPERKRAPQTYEKEEDEDKGVACSKDEWWWDCLEVLRDNTLVTLANISGQLDLSAYTESI
CLPILDGLLHWMVCPSAEAQDPFPTVGPNSVLSPQRLVLETLCKLSIQDNNVDLILATPP
FSRQEKFYATLVRYVGDRKNPVCREMSMALLSNLAQGDTLAARAIAVQKGSIGNLISFLE
DGVTMAQYQQSQHSLMHMQPLPLEPPSVDMMCRAAKALLAMARVDENRSEFLLHEGRLLD
ISISAVLNSLVASVICDVLFQIGQL
NT seq
7098 nt
NT seq
+upstream
nt +downstream
nt
atggcccataactcgagcgcggcggccgccgccgccagcactaacagcgccaagagcggc
ggatccgaggcggctctcaaggagggtggaagcgccgccgcgctgtcctcctcctcctcc
gcggcgtcctcctcttcctcctcgtcgggcccgagctcggccatggagacggggctgctc
cccaaccacaaactgaaaaccgttggcgaagccccctccgcaccgccccaccagcagcac
caccagcaccaccatgcccaccaccagcaccaccatgcccaccacctccaccaccaccac
cacgcattacagcagcagctaaaccagttccagcagcagcagcagcagcaacagcaacag
cagcagcagcagcagcaacagcagcagcagcagcagcagcaacaacatcccatttccagc
aacagcagcctcggcaacgcgggcggcggcggggctcagcccggtcccgacatggagcag
ccgcaacatggaggcgccaaggacagtgccgcgggcagccaggccgacccccctggccag
cctctgctgagcaagccgggcgacgaggacgacgcaccgcccaagatgggggagccggcg
tgcggccggtacgagcacccgggcctgggcaccctgggcgcgcagccgccgccggtggcc
gtgcccgggggcggcggcggcggccccgcagccgtctcggagtttaataattactatggc
agcgctgcccctgctagcggcggccccggcggccgcgctgggccttgctttgatcaacat
ggcggacaacaaagccccgggatggggatgatgcactccgcctcagccgccgccggagcc
cccaacagcatggaccccctgcagaactcccacgaagggtaccccaacagccagtacaac
cattatccgggctacagccggcccggcgcgggcggcggcggcggcggcggcggcggagga
ggaggaggcagcggaggaggaggaggaggaggaggaggaggaggagcgggagcgggagcg
ggagctgtggcggcggcggccgcggcggcggcggcagcagcagcagcaggaggcggcggc
ggcggcggcggcggctatgggggctcgtcctcggggtacggggtgctgagctccccccgg
cagcagggcggcggcatgatgatgggccccgggggcggcggggccgcgagcctcagcaag
gcggccgccggcgcggcggcggggggcttccagcgcttcgccgggcagaaccagcacccg
tcgggggccaccccgaccctcaaccagctgctcacgtcgcccagccccatgatgaggagc
tacggcggcagctaccccgactacagcagccccagcgcgccgccgccgccgccgtcgcag
ccccagtcccaggcggcggcggcgggggcggcggcgggcggccagcaggcggccgcgggc
atgggcttgggcaaggacctgggcgcccagtacgccgccgccagcccggcctgggcggcc
gcgcaacaaaggagccacccggcgatgagtcccggcacccccggccccgccatgggccga
tcccagggcaacccaatggatcccatggtgatgaagagacctcagttgtatgggatgggg
agtaaccctcattctcagcctcagcagagcagcccttacccgggaggttcctacggcccc
ccaggcccacagcggtatccaattggcatccagggtcggaccccaggggccatgggcgga
atgcagtacccacagcagcagatgccccctcagtatggacagcaaggtgtgagtgggtac
tgccagcagggccagcagccttattacaaccagcagccgcagcccccgcaccttccgccc
caggctcagtacctgccgtcccagtcccagcagaggtaccagccgcagcaggacctgtct
caggaaggctatggaactaggtctcaacctcctctggctcctggaaaacctaaccatgaa
gacttgaacttgatacaacaagaaagaccatcaagtttaccaaatactgttgtctatgtg
gaagcagagagttcctccttggttgaagtcctgacctcggaggataccgcctttggactc
aaggacctgtctggctccattgatgacctccccacgggaacggaagcagctctgagctca
gcggtcagtgcatccgggtccacgagcagccaaggggatcagagcaacccagctcagtca
cctttctccccacacgcatccccccatctctccagcatccctgggggaccatcaccttct
cctgtcggctctcctgtaggaagcaaccagtcacgatctggcccaatttctcctgcaagt
attccaggcagtcagatgcctcctcagccacccgggagccagtcggaatctagttcccat
cctgccttgagccagtcaccaatgccacaagaaagaggttttatggcaggcacacaaaga
aaccctcagatgtctcaatatggacctcaacagacaggaccatccatgtcgcctcatcct
tctcctggaggccagatgcatcctggaatcagtagctttcagcagagtaactccagtggg
acttacggtccacagatgagccagtatggaccacaaggtaactactccaggcccccaacg
tatactggggtgcccagtgcaagctacagcggcccggggcctggcatgggcatcaatgcc
aacaaccagatgcatggacaagggccaagccagccatgtggtgctgtgcccctgggacga
atgccatcggctgggatgcagaacagaccgtttcctggaaatatgagcagcatgaccccc
agttctcctggcatgtctcagcagggcgggccaggaatggggccaccaatgccaaccgtg
aaccgtaaggcacaggaggcagccgccgcagtgatgcaggccgctgcaaactcagcacaa
agcaggccaccacacattaggtcgcctgcttatcccagccagtctggggctggcggacgc
cccatgttttcttcccagcaccccaactatggcaactctcaggctcccatgatgcaccag
cctgaccagtacgggcaaggcagtttcccgggcatgaatcagagtggacttatggcttcc
agctctccctacagccagcccatgaacaacaactcggggctcatgaacacccaggcaccg
ccctacagcatgacacccaacatggtgaacagctccacagcatctatgggtcttgcagat
atgatgtctcctggtgaatccaaattgcccctgcctctcaaagcagacggtaaagaagaa
ggaactccacagcctgagagcaaggcgaaggatagctacagctctcagggtatttctcag
cccccaacccccggcaacctgccagtcccctccccaatgtcccccagctctgctagcatc
tcctcatttcatggagatgaaagtgatagcattagcagcccaggctggccaaagactcca
tcaagccctaagtccagctcatccaccaccactggagaaaagatcacaaaggtgtatgag
ttggggaatgagccagagagaaagctgtgggttgaccgctaccttaccttcatggaagag
agaggctctcctgtcacaagtctgcctgcagtgggcaagaagcccctggatctgttccgg
ctctatgtctgcgtcaaagagattggcggtttggcacaggttaataaaaacaagaagtgg
cgtgaactggcaaccaacctcaacgttggcacttcaagcagtgcagcgagctccctgaaa
aagcagtatatccagtacctgtttgcctttgagtgcaagatcgagcgcggggaggagccc
ccgccggaagtcttcagcaccggggagaccaagaagcagcccaagctgcagccgccatct
cctgctaattcaggatccttgcaaggtccacagaccccccaatcaactggcagtaattcg
atggcagaggttccaggtgacctgaagccacctactccagcctccacccctcatggacag
atgaccccaatgcaaggtggaagaagcagtacagtcagtgtgcacgacccattctcagac
gcgagtgacgcgtcgttcccaaaacggaactccatgactccaagcgccccgtaccagcag
ggcatcagcatgccagacgtgatgggcaggatgccctatgagcccaacaaggaccccttt
ggtgggatgagaaaagtgcctgggagtagtgagcccttcatgacgcaaggacagatggcc
ggtagcagcatgcaggacatgtacaaccaaagttcctccggagccatgtccagtctgggc
atggggcagcggcagcagtttccctatggaaccagttatgatcgaaggcatgaaccttac
gggcagcagtacccaggccaaggccctgcgtcaggacagccgccatatgcaggacaccag
cctggcctgtatccacagcagccgaattacagacgccatatggacggcatgtacgggcct
ccagccaaacgccacgagggggacatgtacaacgtgcagtacggcagccagcagcaggag
gtgtacaaccagtacgggagttcctactcgggacccgagaggaggcccatccaggggcag
tacccgtacccctacaccagagagaggatgcagggcccggggcagatacagccgcacgcg
ctgccccccatgatgggcgctcccatgccgtcgtcctcgggcgaggggcctccgcagagc
atgtgggcgacgcgcaatgatatgccttacccctaccagaaccggcagggccccggcggc
cctgcccaggcacctccgtatccaggcatgagccgcacggatgacatgatggtacctgat
caaaggataaatcacgagagccagtggccttctcacgtcagccagcggcagccttacatg
acctcgtcagcccccatgcagcccatcacgcgcccgccgcaggcgtcctaccagacgccg
ccctcactgccaaaccacatctccagggcgcccagccccgcctccttccagcgctcgctg
gagagccgcatgtctcccagcaagtccccctttctgccgtccatgaagatgcagaaggtc
atgccctccgtgcccacgtcccaggtcgccggcccgcccccccagcccccgcccatcaga
agggagattacctttcctcctggctccgtggaagcatcccagccagtcctgaaacaaagg
cgaaagattacctcaaaggacatcgttactccagaggcatggcgtgtgatgatgtccctg
aagtcaggtcttttggctgaaagtacttgggctttggacactattaatattcttctatat
gatgacagcactgtcgctacattcaatctctcccagttgtctggatttctcgaactttta
gtagagtactttagaaaatgcctgattgacatttttggaattcttatggaatatgaagtg
ggagaccccagccaaaaagcacttgaccacaatgcaatgacgagaagtgacagccagtcc
ttggccgacgattctgggaaagaggacgaagatgctgaatgtattgaggaggaggacgag
gacgaggacgaggaggaagacagcagaaaggcagacacggaggagaggagcagcacggcc
ttgactcctcccgaggccactgcagatccaaaggagaagcccaggcaagccagcaagttc
gacaagctgccaatcaagatagtcaaaaagaacaacctgtttgttgtcgaccgatctgac
aagctggggcgtgttcaagagttcagcagcggacttctgcactggcagctgggtgggggc
gacaccaccgagcacatccagactcactttgagagcaagatggaaattcctccgcgcagg
cgtcctcctccccctttaagctccacaggccgaaagaaagagcaagaaggaaaaggggat
tcagaagaacagcaagagaagagcatcattgcaaccattgatgacgtcctgtcggcccgg
ccaggggcactgcccgaggacgcgaacccgggcgcccccgctgaaagcagcaagtttccc
ttcggcatacaccaggccaagagccaccggaacatccggctgctggaggacgagccacgg
agccgggacgagaccccgctctgcaccatcgcgcactggcaagactcgctggcgaagcgc
tgcatctgtgtgtccaacattgtgcggagcttgtcttttgtgcctggcaacgacgccgag
atgtccaaacatccaggcttggtgctcatcctggggaagctcattctccttcaccaccag
catcccgagagaaaacgagcgccacaaacctatgagaaagaggaagacgaggacaagggg
gtggcctgcagcaaagacgagtggtggtgggactgtctggaggtcttacgggataacacg
ttggtcacgttagccaacatctccgggcagctagacttgtcggcgtacacggaaagcatc
tgcttgcccatcctggatggcttgctgcactggatggtgtgcccgtctgcagaggcacaa
gaccccttcccaactgtggggcccaactctgtcctgtcgcctcagagacttgtgctggag
accctctgtaaactcagtatccaggacaataatgtggacctgatcttggccacgcctccg
tttagccgtcaggagaaattctatgccacgttagttaggtacgttggggatcgcaaaaac
ccagtctgtcgagaaatgtccatggcgcttttatcgaaccttgcccaaggggacacgctg
gcagcacgggcaatagctgtgcaaaaaggaagcattggaaacttgataagcttcctagag
gacggggtcacgatggcccagtaccagcagagccagcacagtctcatgcacatgcagccc
ctgcctctggaaccgcccagcgtggacatgatgtgcagggcggccaaggccctgctggcc
atggccagggtggacgagaaccgctcagagttcctgctgcacgagggtcggttgctggac
atctcgatatcggccgtcctgaactctctggtcgcgtctgtcatctgtgatgtactgttt
cagatcgggcagttatga
DBGET
integrated database retrieval system
