KEGG   Rhinolophus hipposideros (lesser horseshoe bat): 308491859
Entry
308491859         CDS       T12007                                 
Symbol
TBP
Name
(RefSeq) TATA-box-binding protein isoform 1
  KO
K03120  transcription initiation factor TFIID TATA-box-binding protein
Organism
rhii  Rhinolophus hipposideros (lesser horseshoe bat)
Pathway
rhii03022  Basal transcription factors
rhii05016  Huntington disease
rhii05017  Spinocerebellar ataxia
rhii05165  Human papillomavirus infection
rhii05166  Human T-cell leukemia virus 1 infection
rhii05203  Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:rhii00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    308491859 (TBP)
 09160 Human Diseases
  09161 Cancer: overview
   05203 Viral carcinogenesis
    308491859 (TBP)
  09172 Infectious disease: viral
   05166 Human T-cell leukemia virus 1 infection
    308491859 (TBP)
   05165 Human papillomavirus infection
    308491859 (TBP)
  09164 Neurodegenerative disease
   05016 Huntington disease
    308491859 (TBP)
   05017 Spinocerebellar ataxia
    308491859 (TBP)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:rhii03000]
    308491859 (TBP)
   03021 Transcription machinery [BR:rhii03021]
    308491859 (TBP)
Transcription factors [BR:rhii03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   TATA-binding proteins
    308491859 (TBP)
Transcription machinery [BR:rhii03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     308491859 (TBP)
  RNA polymerase III system
    TFIIIB
     308491859 (TBP)
  RNA polymerase I system
    SL1/TIF-1B
     308491859 (TBP)
SSDB
Motif
Pfam: TBP TFIIA HerA_C
Other DBs
NCBI-GeneID: 308491859
NCBI-ProteinID: XP_080892092
LinkDB
Position
3:complement(87996..98344)
AA seq 323 aa
MDQNNSLPPYAQGLASPQGAMTPGIPIFSPMMPYGTGLTPQPIQNPSSLSVLEEQQRQQQ
QQQQQQQQQQQQQAAVTTVTAVTAAAQQVAAQQATQGASGPTPQLFHSQTLTTAPLPGTT
PLYPSPMTPMTPITPATPASESSGIVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKR
FAAVIMRIREPRTTALIFSSGKMVCTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQ
NMVGSCDVKFPIRLEGLVLTHQQFSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAK
VRAEIYEAFENIYPILKGFRKTT
NT seq 972 nt   +upstreamnt  +downstreamnt
atggatcagaacaacagcctgccaccatatgctcagggcctggcctcccctcagggcgcc
atgaccccgggaatccccatcttcagccccatgatgccgtacggcacggggctgacccca
cagccgatccagaaccccagcagcctgtctgtcctggaggagcagcagcggcagcaacag
caacagcagcagcagcagcagcagcagcagcagcagcaggcagcggtgacgacggtgaca
gcggtgacagccgcagcacagcaggtggcagcccagcaagcaactcagggtgcctcgggc
cccaccccgcagcttttccactcacagactctcacgaccgcgccattgccaggcaccacg
cccctgtacccctcgcccatgacccccatgacccccatcacgcctgccacacccgcctcc
gagagctctgggattgtgccccagctgcaaaatattgtatccaccgtgaatcttggttgt
aaacttgacctaaagaccattgcacttcgtgcccgaaatgctgaatataatcccaagcgg
tttgctgctgtgatcatgagaatacgagagccccggaccactgccctgatattcagctcc
gggaaaatggtgtgcacaggggccaagagcgaagagcaatcccgactagcagccaggaag
tacgcccgagtcgtgcagaaactgggcttcccagccaagttcttggacttcaagattcag
aacatggtggggagctgcgatgtgaagttcccaatccggctggagggccttgtgctgacc
caccagcagttcagcagttatgagccagagctatttcctggtttaatctacagaatgatc
aagcccagaattgttctccttatttttgtttctggaaaagttgtattaacaggtgctaaa
gtcagagcagaaatttacgaagcatttgagaacatctaccctatcctaaagggcttcagg
aagacaacgtag

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