Rhinolophus hipposideros (lesser horseshoe bat): 308492342
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Entry
308492342 CDS
T12007
Symbol
POLE
Name
(RefSeq) DNA polymerase epsilon catalytic subunit A
KO
K02324
DNA polymerase epsilon subunit 1 [EC:
2.7.7.7
]
Organism
rhii Rhinolophus hipposideros (lesser horseshoe bat)
Pathway
rhii03030
DNA replication
rhii03410
Base excision repair
rhii03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
rhii00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
308492342 (POLE)
03410 Base excision repair
308492342 (POLE)
03420 Nucleotide excision repair
308492342 (POLE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rhii03032
]
308492342 (POLE)
03400 DNA repair and recombination proteins [BR:
rhii03400
]
308492342 (POLE)
Enzymes [BR:
rhii01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
308492342 (POLE)
DNA replication proteins [BR:
rhii03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase epsilon complex
308492342 (POLE)
DNA repair and recombination proteins [BR:
rhii03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase epsilon complex
308492342 (POLE)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF1744
POL2_thumb
DNA_pol_B_exo1
zf_DPOE_2
zf-DPOE
DNA_pol_B
DNA_pol_B_exo2
RNase_H_2
APP_N
Motif
Other DBs
NCBI-GeneID:
308492342
NCBI-ProteinID:
XP_080893316
LinkDB
All DBs
Position
24:232119..268149
Genome browser
AA seq
2240 aa
AA seq
DB search
MDVRFGFERLKEPGERTGWLINMHPTEVLDEEKRLVSAVDYYFIQDDGSRFKVALPYKPY
FYIATRKGCEREVSSFLSKKFQGKIAKVETVPKEDLDLPNHLVGLKRNYIKLSFNTVEDL
VRVRKEISPAVKKNQEQSHTRDTYTAMLSSVLQGGSVILDEEEASKKTADQLDNIVDMRE
YDVPYHIRLSIDLKIHVAHWYNVRYRGNAFPVEVTRRDDLVERPDPVVLAFDIETTKLPL
KFPDAETDQIMMISYMIDGQGYLITNREIVAEDIGDFEFTPKPEYEGPFCVFNEPDEVHL
IQRWFEHVQETKPTIMVTYNGDFFDWPFVEARAAAHGLSMYEEIGFQKDSQGEYKAPQCI
HMDCLRWVKRDSYLPVGSHNLKAAAKAKLGYDPVELDPEDMCRMATEQPQTLATYSVSDA
VATYYLYMKYVHPFIFALCTIIPMEPDEVLRKGSGTLCETLLMVQAFHANIIFPNKQEQE
FNKMTNDGHVLDSETYVGGHVEALESGVFRSDIPCRFRMNPAAFDFLLQRVEKTMRHAIE
EEEKVPMEQVANFQEVCDQIKNKLTSLKDVPNRIECPLIYHLDVGAMYPNIILTNRLQPS
AMVDEATCAACDFNKPGANCQRKMAWHWRGEFMPASRSEYHRIRHQLESEKFPPLTPEGP
ARAFHELSREEQAKYEKRRLADYCRKAYKKTHVTKVEERLTTICQRENSFYVDTVRAFRD
RRYEFKGLHKVWKKKLCAAVEAGDAAEVRRCRNMEVLYESLQLAHKCILNSFYGYVMRKG
ARWYSMEMAGIVCFTGASIITQARELIEQIGRPLELDTDGIWCVLPNSFPENFVIKTTCV
KKPKVTVSYPGAMLNIMVKEGFTNEQYQALAEPASLTYVTRSENTIFFEVDGPYLAMILP
ASKEEGKKLKKRYAVFNEDGSLAELKGFEVKRRGELQLIKIFQSSVFEAFLKGSTLEEVY
DSVAKVADYWLDVLYSKAANMPDSELFELISENRSMSRRLEDYGEQKSTSISTAKRLAEF
LGDQMVKDAGLSCRYIISRKPEGSPVTERAIPLAIFQAEPSVRRHFLRKWLKSSSLQDFD
IRTILDWDYYIERLGSAIQKIITIPAALQQVRNPVPRVKHPEWLHRKLLEKNDIYKQKKI
SELFILEGKRQVGPAQAPQGTPSLGASDMEDFGRVKPPHLAVPLATKRKRVLWESQEESQ
DLELTVPWQEVLGRPPALGTTQEEWLVWLRFHKKKWQLQARQRLARRKRRCLEGAEGAPQ
PGAIRDGPSAGLGGFLRRTARSILDLPWQIVQISETTQAGVFRLWAVIGSDLHCIKLHVL
RVFYVNQRVPKAEEGPSSRKVNRILPRSHAVYNLYKYSVPEDMYQGHINEISTELSAPDI
EGVYETQVPLLFRALVQLGCVCVVSKQLRRPLSGWETDAFALEHLEMRSLAQFSYLEPGS
IRHIYLYHRTQGHKALFGVFVPSQRRASVFVLDTVRSNQMPNLSALYTAEHGLLLDKVGP
ELLPPPKHTFEVRAETDLKTLCRAIQRLLLVYKEERRGPTLIAVQSSWELRRLSSEVPVL
EEFPLVPIRVADHISYSVLDWQRHGARHMLRHYLNLDTCLSQAFEMSRYFHVPVGNLPED
ISTFGSDLFFARHLQCHNHLLWLSPTPRPDLGGKEADDNRLVMEFDDQATVEINSPGCHS
TVCVELDIQNLAVNTILQSHHINDMEGADSMGISFDVTQQASLEDMITGNQAASAPASYD
ETALCSSTFRILKSMVVGWVKEITQYGNIYADNQVVHFYRWLRSPSSLLYDPALHRTLHG
WMKKLFLQLIAEFKRLGSSVVYANFNRIVLCTRKRRVEDALAYVEYITSSIHSKEIFHSL
TISFSRCWEFLLWMDPSNYGGIKGNVPSGIHCGQRDSPKEDSTQGAEDEDEGEEEEEGGG
GQEPDVEDLLENNWNLVQFLPQAASCQTYFLMVVSAYIVAVHHSVQEELRRSAPGSTPVK
RRGASQPSQEAQGAAAALPGVITFSQDYVANELTQTFFTITQKIQKKVTGSRNVAELSEM
FPVLPGSHLLLNNPALEFIKCVCKVLSLDTNITNQVNKLNRDLLRLVDVGEFSAEAQFRD
PCRSYVLPEVICHSCHFCRDLDLCKDPFVSQDGAMPPRWLCSNCQVAYDSSVIEMALVAV
LQKKLMAFTLQDLVCLKCGGVKETHMPMYCSCAGGFGLTIHTKVFMEQIRIFRNIAQHYG
MSYLMETLEWLLEKNPHLGH
NT seq
6723 nt
NT seq
+upstream
nt +downstream
nt
atggatgtgcggtttgggtttgagaggctcaaggaaccgggcgagaggacaggctggctc
atcaacatgcatcctactgaggttttagacgaagagaagcgcttagtcagtgcagtggat
tactactttattcaagatgatggcagcagatttaaggtggccttgccctacaagccgtac
ttctacattgcgaccagaaagggttgtgaacgagaagtttcatcttttctctctaagaag
tttcagggtaaaatcgctaaagtagagactgtccccaaagaggatctggacttgccaaat
cacttggtgggtctgaagcggaattacattaagctgtcgttcaacaccgtggaggacctt
gtcagggtgaggaaggagatctcccctgccgtgaagaagaaccaggagcagagccacacc
cgcgacacctacacagccatgctctccagtgtcctgcaaggcggcagtgtgatcctcgac
gaagaggaagcctctaagaagactgccgaccagctggacaacatcgtggatatgcgggag
tacgatgtgccctaccacatccgtctctccatcgacctgaagatccacgtggctcactgg
tacaatgtcaggtaccgaggaaacgcctttccagtggaggtcacccgccgggatgacctg
gtcgaacgacctgatcctgtggtgttggcatttgacattgagacgaccaagctgcccctc
aagtttcccgatgctgagactgaccagattatgatgatttcctatatgatcgatggtcag
ggctacctcatcaccaacagggagattgttgctgaggacattggtgactttgagttcacc
cccaagccggaatacgaagggcccttctgtgtcttcaatgaacccgatgaggttcatcta
atccaaaggtggtttgaacacgtccaggagaccaagcccaccatcatggtcacctacaac
ggggacttttttgactggcccttcgtggaggccagagcagcagcccacggactgagcatg
tacgaggagattgggttccagaaggacagccagggggagtacaaggcgccccagtgcatc
cacatggactgtctcaggtgggtgaagagggacagttaccttccggtgggcagccacaac
ctcaaggcggccgccaaagccaagctgggctatgaccccgtggagctggaccctgaggac
atgtgccggatggccacggagcagccccagacgttggccacatactcggtgtcagacgca
gtggccacgtactacctgtacatgaagtacgtccaccccttcatatttgctctgtgcacc
atcatccccatggagcccgacgaggtgctgcggaagggctctgggacgctgtgcgagacc
ttgctgatggtgcaggctttccacgccaacatcatcttccccaacaagcaggagcaggag
ttcaacaagatgaccaatgatggccacgtgctggactctgagacctacgtgggcggccac
gtggaggccctggagtccggcgtgttccgcagtgatatcccctgccggttcaggatgaat
cccgccgcctttgacttcctgctgcaacgcgtggagaagaccatgcgtcacgctatcgag
gaagaggagaaggtacccatggagcaggtcgccaacttccaagaggtgtgtgatcagatt
aagaacaagctcacctccctgaaagatgttcctaacagaatcgagtgtccccttatctac
cacctggatgtgggggctatgtacccaaacatcatcctgacgaaccgcctgcagccctct
gccatggtggacgaagccacctgtgctgcctgtgacttcaacaagcccggagcaaactgt
cagcgcaagatggcctggcattggaggggcgagttcatgccggccagccgcagcgagtac
catcggatccggcaccagctggaatcggagaagttccctcccttgaccccagagggtcca
gcccgggcctttcatgagctgtcgcgcgaggagcaggccaaatacgagaagaggagactg
gcagattactgccggaaggcctacaagaagacccacgtgaccaaggtggaggagcgcctc
accaccatctgccagcgggagaactccttctacgtggacaccgtgcgtgccttccgcgac
cggcgctatgagttcaaaggtctccacaaggtgtggaagaagaagctgtgtgcggccgtg
gaggcaggtgacgcagcggaggtgaggcgctgcaggaacatggaggtgctgtacgagtcg
ctgcagctcgcacacaagtgcattctcaactccttctatggctacgtcatgcgcaaaggg
gcccgctggtactccatggagatggccggcattgtctgcttcacaggggccagcattatc
acgcaggcgcgggaactgatcgagcagattgggaggcccttagagctggacacagatgga
atatggtgcgtgctgcccaacagcttccctgaaaactttgtcatcaagacaacgtgcgtg
aaaaagcccaaggtgaccgtgtcctaccctggggccatgttaaacatcatggtcaaggaa
ggcttcaccaatgagcagtaccaggcgctggccgagcctgcctcgctcacctatgtcacc
cgctcagagaacaccatcttctttgaggtcgacgggccctacctggccatgattctccca
gcctccaaggaggagggcaagaaactgaagaagagatacgctgtgttcaacgaggatggt
tccctggccgagctaaagggcttcgaggtgaagcgccgtggggagctgcagctgattaag
atcttccagtcctccgtgttcgaggctttcctcaaaggcagcaccctggaggaagtgtac
gactccgtcgccaaggtggccgactactggctggacgtgctgtacagcaaggcagctaac
atgcctgactctgaactgttcgagttgatatctgagaaccgttccatgtctcggaggctg
gaagattacggggagcagaagtcgacgtccatcagtacagccaagcgcctggccgagttc
ctgggtgaccagatggtgaaggacgcagggctaagctgccggtacatcatctcccggaag
cccgaggggtctcccgtcacagagagggccatcccactcgccattttccaggcagagccc
tcggtgaggaggcactttctccggaaatggctgaagagctcttcccttcaagactttgat
attcggacgattctggactgggactactacatcgagaggctgggcagcgccatccagaag
atcatcacgattcctgcggctctgcaacaggtgaggaacccagtgccacgcgtcaaacac
cccgagtggctgcacagaaagctgctggagaagaatgacatctacaagcagaagaagatc
agtgagctcttcatccttgagggcaagagacaggtgggcccggcccaggctccccaaggc
accccgagccttggagcatcagacatggaggacttcggccgagtgaagccaccccacttg
gcagttcccttggcgactaagaggaaacgcgtcctctgggagagccaggaggagtcgcag
gacctggagctgacggtgccttggcaggaggtcctggggcggcctccagccctcggaacc
acccaggaagagtggctggtctggctgcgattccacaagaagaagtggcagctacaggcc
cgacagcgcctcgctcgcaggaagaggcggtgtctagagggagcggagggtgcaccgcag
cctggggccatccgagatggaccctccgcagggctggggggcttcctgcgaagaaccgcc
cgcagcattctggaccttccgtggcagattgtgcagatcagtgagaccacccaggccggc
gtgttcaggctgtgggctgtcatcggcagcgacttgcattgcatcaagctgcacgtcctc
cgtgtgttctacgtgaaccagcgggtgcccaaagcagaggaggggccttcgtctcgcaag
gtgaatcgaatccttcctcgctcccacgcggtgtataacctgtacaagtactcggtacca
gaggacatgtaccagggacacatcaatgagatcagcactgagctgtcggcccccgacatc
gagggcgtgtatgagactcaggtcccgctgctgttccgggccctggtgcagctgggctgt
gtgtgtgtggtcagcaagcagctgcgcaggcccctgtcaggctgggagacggacgccttc
gctctcgagcatctggagatgcgctcgctggcccagttcagctacctggagccagggagc
atccgccacatctacctgtatcatcgcacacaaggccacaaggcgctgttcggcgtcttc
gtgccctcgcagcgcagggcatccgtgtttgtgttggacaccgtgcgaagcaaccagatg
cccaacctgagcgccctctacacagccgagcacggcctcctgctggacaaagtgggcccc
gagctcctgcctcccccaaaacacacctttgaggttcgggctgagacagacttgaagacc
ctctgcagggccatccagcgcctcctgctggtctacaaggaggagcgcagagggcccacc
ctcatcgccgtgcagtccagctgggagctgaggaggctctccagcgaggtccctgtcctg
gaggagttcccgctggtgcccatccgcgtggccgaccacatcagctacagcgtcctggac
tggcagcgccacggagcccgccacatgctccgtcactacctcaacctggacacctgcctg
tcgcaggccttcgagatgagccggtacttccacgtccccgttgggaacctgcccgaggac
atctccaccttcggctccgacctcttctttgcccgccacctgcagtgccacaaccacctg
ctctggctgtcccctacgccccgccccgacctgggcgggaaggaggcagacgacaaccgc
cttgtcatggagttcgatgaccaagccactgtggagatcaacagtccaggctgtcactca
acggtgtgcgtggagttggacattcagaacctggccgtcaacaccatcctgcagtctcac
cacatcaatgacatggagggggccgacagcatgggcatcagcttcgacgtgacccagcag
gcgtccctggaggacatgatcaccggcaatcaggcggccagtgccccggccagctacgac
gagacggccctctgctccagcaccttcaggatcctgaagagcatggtggtgggctgggtg
aaggagatcacgcagtacggcaacatctacgccgacaaccaggtcgtgcacttctaccgc
tggctgcgctcgccctcctccctgctgtacgaccccgccctgcaccgcaccctgcacggc
tggatgaagaaactcttcctgcagcttattgccgagttcaagcgcctggggtcatcggtc
gtctatgccaacttcaaccgcatcgtcctgtgcacgaggaagcggcgggtggaggacgcg
ttggcctatgtggagtacatcaccagcagcatccattctaaagagatcttccattctttg
acgatttctttctcgcgatgctgggagttccttctctggatggatccgtctaactatggt
ggaatcaaagggaatgtgccatctggcatccactgtggacagcgggactctccaaaggag
gacagcacgcagggggccgaggacgaggacgagggtgaggaggaggaagaggggggcggt
ggtcaggagccggacgtggaggacttgctggagaacaactggaacctcgtgcagttcctg
ccacaggcagcctcctgccagacctacttcctcatggtcgtgtcagcatacatcgtggcc
gtgcaccacagcgtgcaggaggagctgagacgcagcgccccgggtagcacccccgtgaag
agacggggggccagccagccatcacaggaggcccagggcgcagctgcagcccttcccggg
gtgatcaccttctctcaggactacgtggcaaacgagctcactcagaccttcttcaccatc
acgcagaagattcagaagaaagtcacagggtccaggaacgtggctgagctctcagagatg
tttcctgtcctgcccggctctcacttgctgctcaataaccctgcactggagttcatcaag
tgtgtgtgcaaggtcctgtccctggacacaaacatcacaaaccaggtgaacaagctgaac
cgggacctgctccgcctggtggatgtcggcgagttctcggcagaggcccagttccgagac
ccctgccgctcctacgtgctccccgaggtcatctgccacagctgtcacttctgccgggac
ctggacctgtgcaaagacccctttgtctcccaggatggggccatgcctccccggtggctg
tgctccaactgtcaggtcgcctacgactcgtccgtcattgagatggcgctggtggcggtc
ctgcagaagaagctgatggccttcacgctgcaggacctggtctgcctgaagtgcgggggt
gtgaaggagacccacatgcccatgtactgcagctgtgccgggggcttcggcctgaccatc
cacaccaaggtcttcatggagcagatcagaattttccggaacattgcccagcactatggc
atgtcgtacctcatggagaccctggagtggctgctggagaagaacccccacctgggccat
tag
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integrated database retrieval system
