Rhinolophus hipposideros (lesser horseshoe bat): 308493847
Help
Entry
308493847 CDS
T12007
Symbol
ATXN2L
Name
(RefSeq) ataxin-2-like protein isoform 10
KO
K23625
ataxin-2
Organism
rhii Rhinolophus hipposideros (lesser horseshoe bat)
Pathway
rhii05014
Amyotrophic lateral sclerosis
rhii05017
Spinocerebellar ataxia
rhii05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
rhii00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
308493847 (ATXN2L)
05017 Spinocerebellar ataxia
308493847 (ATXN2L)
05022 Pathways of neurodegeneration - multiple diseases
308493847 (ATXN2L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rhii03019
]
308493847 (ATXN2L)
Messenger RNA biogenesis [BR:
rhii03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
308493847 (ATXN2L)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SM-ATX
LsmAD
PAM2
DUF5415
Motif
Other DBs
NCBI-GeneID:
308493847
NCBI-ProteinID:
XP_080896824
LinkDB
All DBs
Position
27:complement(19704241..19716320)
Genome browser
AA seq
1103 aa
AA seq
DB search
MLKPQPPQQTAQPQQPPATPQAGARRPPGGASPPNGGLPAPPASAAAPPGPPAAPSACLG
PAAAAGSGLRRGPEGIAAPPPPPPQHQERPGAAAIGSARGQSTGKGPPQSPVFEGVYNNS
RMLHFLTAVVGSTCDVKVKNGTTYEGIFKTLSSKFELAVDAVHRKVSEPAGGPRREDIVD
TMVFKPSDVMLVHFRNVDFNYATKDKFTDSAIAMNSKVNGEHKEKVLQRWEGGDSNSDDY
DLESDMSNGWDPNEMFKFNEENYGVKTTYDSSLSSYTVPLEKDNSEEFRQRELRAAQLAR
EIESSPQYRLRIAMENDDGRTEEEKHSGVQRQGSGRESPSAVSREGKYIPLPQRVREGPR
GGVRCSSSRGGRPGLSSLPPRGPHHLDSSSPGPGSETRGINGGPSRMSPKAQRPLRGAKT
LSSPSSRPSGESSVPPAAPAAFPFLPVGRMYPPRSPKSAAPAPVSPSCPESPIGSAVPTS
SASIPVTSSIVDPGVGSISPASPKISLASADVKELAAKEPGRTLESQELSRISGKVPGLQ
NEQKRFQLEELRKFGAQFKLQPSSSPETSLDPFPPRILKEEAKGKEKEVDGLLTSDAMGS
PVSSKTESVLDTDDKPPLPAAGGTEGPEQPPTSCPSQAGSPPLGLKADDKDDGPVAEQVK
KSTLNPNAKEFNPAKPLLSVNKSTSTPTSPGPRTHPAPSIPVLTAGQSGLYSPQYISYIP
QIHMGPAVQAPQMYPYPVSNSVPGQQGKYRGAKGSLPPQRSDQHQPASAPPMMQAAAAAG
PPLVAATPYSSYIPYNPQQFPGQPAMMQPMAHYPSQPVFAPMLQSNPRMLTSGSHPQAIV
SSSTPQYPSAEQPTPQALYATVHQSYPHHATQLHAHQPQPATTPTGSQPQSQHAAPSPVQ
HQAGQAPHLGSGQPQQNLYHPGALTGTPPSLPPGPSAQSPQSSFPQPAAVYAIHAHQQLP
HGFTNMAHVTQAHVQTGITAAPPPHPGAPHPPQVMLLHPPQSHGGPPQGAVPQSGVPALS
ASTPSPYPYIGHPQGEQPGQAPGFPGGADDRILCRVGRSHRRRRQGLVPGSVLCFPPSSL
SCDPAAPLPTASPALSDPDCLLT
NT seq
3312 nt
NT seq
+upstream
nt +downstream
nt
atgttgaagccgcagccgccacaacagaccgcccagccccagcagccgcccgccacgccg
caggccggggcccgccggcctcccgggggcgccagcccgcccaacggcggcctcccggcg
cccccggcctccgccgcggcgcccccggggcctcccgcggccccgtcggcctgcctgggg
cctgcggccgctgccgggagcgggctccgccggggacccgagggcatcgcggcgccgccg
ccgccgccgccgcagcaccaggagaggccgggggcagcggccatcggcagcgccagggga
caaagcacaggaaagggacccccacagtcaccggtgtttgagggtgtctacaacaattcc
agaatgctgcacttccttacagctgtggtgggctccacttgtgatgtaaaggtgaagaat
ggtaccacctatgaaggtatcttcaagactctgagctccaagtttgaactagctgtggac
gctgtgcaccggaaagtgtctgagccagcaggtggccctcgtcgcgaagacattgtggac
accatggtctttaagccgagtgacgtcatgctcgtccacttccgaaatgtggacttcaat
tacgccacgaaagataagttcaccgattcggccatcgccatgaactcgaaggtgaacggg
gagcataaagagaaggtgcttcagcgctgggaggggggcgacagcaacagtgacgactac
gacctggagtctgacatgtccaatggatgggatcccaatgagatgttcaagttcaacgag
gagaattacggtgtaaagaccacttatgatagcagtctctcttcttacacggtgccctta
gagaaggacaactccgaggagtttcgtcagcgggagctgcgtgcagcccagttggctcgg
gagattgagtcgagcccccagtaccgcctgcggattgccatggagaacgatgatgggcgc
actgaggaggagaagcacagtggggtccagcggcagggctcgggccgggagagtcccagc
gcggtgtccagggagggaaagtatatccctctgccccaacgagttcgggaaggtccgcgg
ggcggagttcggtgcagtagttctcggggcggccggcctggccttagctctttgccacct
cgtggccctcaccatcttgacagtagcagccctggccccggttctgagacacgtggtatc
aacggaggcccttcccgcatgtcccctaaggcccagcgacctctgagaggtgccaagact
ctgtcttcacccagcagcaggccttctggagaatcttctgttccacctgctgctcctgca
gctttcccttttcttccagtgggccggatgtaccccccgcgctctcccaagtcggctgcc
cctgcccccgtctcaccttcctgccctgagtctcccatcggctcagcagtacccacctct
tcagcttccattcctgtgacgtcatcaattgtggaccctggagtaggctccatttcccca
gcttctccaaagatttcactggcctccgcagatgtaaaagaacttgcagccaaggagcct
gggaggactctggagtcccaggagctgtcccggatatctggaaaggtccctggccttcag
aatgaacagaaacgctttcaactggaagaactgagaaagtttggggcgcagtttaagctt
cagcccagtagctctcctgagacgagcctggatcctttccctccccggatcttaaaggag
gaggccaaagggaaggagaaggaagttgatggcctgttgacttcagacgccatggggtcc
ccggtctcttccaagacagagtccgtgttggatacggacgacaagccacctctgccagca
gcggggggcacggaggggcccgagcagccccccacctcttgcccaagccaagccggcagc
cccccgctgggtctcaaggccgacgacaaggatgacggccctgttgctgaacaagtgaag
aagtcaaccctgaaccccaacgccaaggagttcaatcctgcgaagcctctgctgtctgtg
aataaatccaccagcactcccacgtctccggggccccggacgcatccagccccgtccatc
ccggtgctgacagcaggccagagcgggctgtacagcccgcagtacatttcctacatacct
cagatccacatggggccggctgtgcaggcacctcagatgtatccgtatcccgtgtccaac
tcagtgcctgggcagcagggcaagtaccggggcgccaaaggctccctgcccccccagcgc
tcggaccagcaccagccagcctctgcccctccgatgatgcaggccgctgccgccgccggc
ccccctctggtggccgccacaccttactcttcctacatcccctacaaccctcagcagttc
ccaggccagcccgccatgatgcagcccatggcccactacccctcacagccggtgttcgcc
cccatgcttcagagcaacccacgcatgctgacgtcagggagccacccgcaggccatcgtg
tcgtcgtccacccctcagtacccgtctgcggagcagcccaccccccaggccctgtacgcc
actgttcaccagtcctatccacaccatgccacgcagctccatgcccaccagccgcagccg
gccaccacgccgactgggagccagccgcaatcccagcacgcagcccccagtcctgtccag
caccaggcggggcaggccccacacctgggcagtggacagccacagcagaatctgtaccac
ccaggggccctgacaggcacgccgccttctctgccaccgggaccttctgcccagtcccct
cagagcagcttcccccaaccagctgctgtgtatgccatccatgcccaccagcagctgccc
cacggcttcaccaacatggcccatgttacccaggcccatgtccaaactggaatcacagca
gccccgccccctcaccctggggctccccacccgccccaggtgatgctgctgcatccaccc
cagagtcatggggggcccccccaaggcgcggtgccccagagcggggtgcctgcactctca
gcttccacaccctcaccctacccctacatcggacacccccaaggtgagcagcctggccag
gcgcctggatttccaggaggagccgatgacaggattctgtgtagggtgggcagaagccac
aggcgccgccgccaggggcttgttcctggctctgtcctttgcttccctccgtcctcgctc
agttgtgatccagcagcccccctccccactgcctccccagctctcagtgaccccgactgc
ctcctgacttag
DBGET
integrated database retrieval system
