Rhinolophus hipposideros (lesser horseshoe bat): 308495015
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Entry
308495015 CDS
T12007
Symbol
NXF3
Name
(RefSeq) nuclear RNA export factor 3
KO
K14284
nuclear RNA export factor
Organism
rhii Rhinolophus hipposideros (lesser horseshoe bat)
Pathway
rhii03008
Ribosome biogenesis in eukaryotes
rhii03013
Nucleocytoplasmic transport
rhii03015
mRNA surveillance pathway
rhii05014
Amyotrophic lateral sclerosis
rhii05164
Influenza A
rhii05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
rhii00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
308495015 (NXF3)
03015 mRNA surveillance pathway
308495015 (NXF3)
03008 Ribosome biogenesis in eukaryotes
308495015 (NXF3)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
308495015 (NXF3)
05168 Herpes simplex virus 1 infection
308495015 (NXF3)
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
308495015 (NXF3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rhii03019
]
308495015 (NXF3)
03009 Ribosome biogenesis [BR:
rhii03009
]
308495015 (NXF3)
Messenger RNA biogenesis [BR:
rhii03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
308495015 (NXF3)
mRNA cycle factors
Stress granule specific factors
308495015 (NXF3)
Ribosome biogenesis [BR:
rhii03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
308495015 (NXF3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NXF_NTF2
LRR_NXF1-5
Tap-RNA_bind
NTF2
RRM_NXF1-2
Motif
Other DBs
NCBI-GeneID:
308495015
NCBI-ProteinID:
XP_080899140
LinkDB
All DBs
Position
X:<54933809..>54964028
Genome browser
AA seq
490 aa
AA seq
DB search
MEKEQKPPERMKEKQDETSGSWFKVIIPFGIRYDEKWLLNLIQKQCSVPFTPVEFHYEKM
QAQFFVEDASIAFALKTVNGKIWDEDNEKVCVKGMTKISVIINPSDAPHSVQKELKSEKL
TMNKQCGVSPDSLDIQRLCFDLDWMTCDTETAPNPRICMAASLQIDEGNMPKHLFFNQSN
QKPYQLDDLSNTMQNASNIEDLNLSNDGVKSAGQLAKGKGLWPEEMSANRSSLCTTIPDN
STNISSILELFPKLLCLDGQEPLPPTNFGIEAHKKLPICKGSSFGSDVLKNLVLQFLQQY
FLIYDSGVRQGLLGAYHDEACFSLTVLFNPTEQASSNLFEYFKDNRNMKNLKDPYLRFQL
LKHTKRDIVCSLCVLPKTQHDFQSFVVDMWFQTERMLCFSVNGVFKEGEEKCQGSVRAFT
RTFITTPDSSFGEFPLTTGSRVSLQLLAVSPQSQTQAASPQPQVRTAFPPPQIQTTFPLL
QMRFASPQLQ
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atggagaaagaacaaaagcctccagagagaatgaaggagaagcaggatgagacctcgggg
agctggttcaaggtcattattccatttggcataagatatgatgagaagtggttgctgaat
ttgattcagaagcagtgcagtgtccccttcactccagtcgaatttcactatgagaaaatg
caggcccagttctttgttgaggatgccagcattgccttcgcgttgaagactgtcaatggc
aagatttgggatgaggataatgagaaggtgtgtgtcaagggtatgaccaagatatctgtc
attatcaacccttctgatgcaccacattctgtgcagaaggagctgaagtcagaaaagctg
accatgaacaagcaatgtggtgtctccccggattctcttgacatccaaagactctgcttt
gaccttgattggatgacctgtgatactgaaacagcaccgaatcctagaatctgcatggct
gcctccctgcagatcgatgaagggaacatgcccaagcatttattctttaaccagagcaac
cagaaaccctaccagctggatgacctgtccaacactatgcagaatgcctccaacatcgag
gacttaaacctctccaatgatggggtaaagtctgcagggcagttggccaagggcaaaggg
ctgtggccagaagagatgagtgcaaacagaagcagtctatgcaccaccatcccagataac
tcaaccaacataagctccatcctggaattgttccccaagttattgtgcctggatggccag
gagccactcccacctactaactttggtattgaagctcacaagaagttaccaatctgcaag
ggaagctcctttggatctgatgtgctgaagaatctagtcctgcaattcctgcagcagtat
ttcttgatctatgattctggagtccgacagggtctccttggtgcttatcatgacgaggcc
tgtttctccctgaccgttctcttcaatcccacggagcaagcctcaagcaacttgtttgag
tacttcaaggataacaggaatatgaagaacctcaaggacccctacctgcggtttcagctg
ctgaagcatacaaaacgtgacattgtgtgctccctctgtgtgttgcccaaaactcagcat
gacttccaatccttcgtggtggacatgtggttccagacggaaaggatgctctgcttctct
gtcaacggggtgttcaaggaaggggaagaaaagtgtcagggttctgtgcgtgccttcacc
cggacattcatcactacccctgacagcagtttcggagaattccctctgactaccggatcc
cgtgtgtctctgcagctgctggctgtgtctccacagtcgcagacccaggccgcatcccca
cagccacaggtgcggaccgcgtttccaccgccacagatacagaccacgtttccactgctg
cagatgcggtttgcgtccccacagctgcagtag
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