Rhinolophus hipposideros (lesser horseshoe bat): 308498153
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Entry
308498153 CDS
T12007
Symbol
CPSF2
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 2
KO
K14402
cleavage and polyadenylation specificity factor subunit 2
Organism
rhii Rhinolophus hipposideros (lesser horseshoe bat)
Pathway
rhii03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
rhii00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
308498153 (CPSF2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rhii03019
]
308498153 (CPSF2)
Messenger RNA biogenesis [BR:
rhii03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
308498153 (CPSF2)
U7-dependent histone pre-mRNA processing factors
308498153 (CPSF2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lactamase_B_6
CPSF100_C
Beta-Casp
RMMBL
Lactamase_B
Anti-Pycsar_Apyc1
Lactamase_B_2
Motif
Other DBs
NCBI-GeneID:
308498153
NCBI-ProteinID:
XP_080905750
LinkDB
All DBs
Position
5:92228490..92265466
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AA seq
782 aa
AA seq
DB search
MTSIIKLTTLSGVQEESALCYLLQVDEFRFLLDCGWDEHFSMDIIDSLRKHVHQIDAVLL
SHPDPLHLGALPYAVGKLGLNCAIYATIPVYKMGQMFMYDLYQSRHNTEDFTLFTLDDVD
AAFDKIQQLKFSQIVNLKGKGHGLSITPLPAGHMIGGTIWKIVKDGEEEIVYAVDFNHKR
EIHLNGCSLEMLSRPSLLITDSFNATYVQPRRKQRDEQLLTNVLETLRGDGNVLIAVDTA
GRVLELAQLLDQIWRTKDAGLGVYSLALLNNVSYNVVEFSKSQVEWMSDKLMRCFEDKRN
NPFQFRHLSLCHGLSDLARVPSPKVVLASQPDLECGFSRDLFIQWCQDPKNSIILTYRTT
PGTLARFLIDNPSEKVTEIELRKRVKLEGKELEEYLEKEKLKKEAAKKLEQSKETDIDSS
DESDAEEDIDQPSAHKTKHDLMMKGEGSRKGSFFKQAKKSYPMFPAPEERIKWDEYGEII
KPEDFLVPELQATEEEKSKLESGLTNGDEPMDQDLSDVPTKCISMTESIEIKARVTYIDY
EGRSDGDSIKKIINQMKPRQLIIVHGPPEASQDLAESCRAFGGKDIKVYMPKLHETVDAT
SETHIYQVRLKDSLVSSLQFCKAKDAELAWIDGVLDMRVSKVDTGVILEEGELKDDGEDS
EMQVDAPSDSSVIAQQKAMKSLFGDDEKETGEESEIIPTLEPLPPNEVPGHQSVFMNEPR
LSDFKQVLLREGIQAEFVGGVLVCNNQVAVRRTETGRIGLEGCLCQDFYRIRDLLYEQYA
IV
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atgacatctataatcaaattaactaccctctctggggttcaagaagagtctgctctttgt
tatcttctccaagtcgacgagtttagatttttattggactgtggctgggatgagcacttt
tctatggatattatagattccctgaggaagcacgttcaccagatcgatgccgtgctattg
tctcaccccgaccccctccatctcggtgccctcccgtacgccgtcggaaagttgggtctg
aactgtgccatctatgcaaccattcctgtttataaaatgggacagatgttcatgtatgat
ctttatcagtctcgacacaatacagaagattttacactctttacattagatgatgtggac
gcagcctttgataaaatacagcagttaaaattctctcagattgtgaatttgaaaggaaaa
ggccatggcttgtccatcacacctctgccagctggtcacatgatcggtggaacgatatgg
aaaatagtcaaagatggagaagaagaaattgtgtatgccgttgacttcaaccacaagagg
gagatccacttaaatggatgttccctggaaatgctaagcagaccctccctactcatcacc
gattcatttaatgccacgtatgtgcagccgaggagaaaacagagagacgagcaacttctg
acaaatgtcctggaaacacttcgaggtgatggaaatgtattaatagcagtggacactgca
ggcagagttttggaacttgctcaactcctggatcagatttggagaacgaaagatgcagga
ttgggtgtttactcattggcactcctgaataatgtcagttacaatgtggtggagttttct
aagtcccaggtagaatggatgagtgataaactgatgagatgttttgaagacaaaagaaat
aacccatttcagtttcgccacctctctttgtgtcatggtctttctgacttggcccgagtg
cctagcccgaaagtggtccttgccagccaacccgacttggaatgcggattttctagggat
ctctttattcaatggtgtcaggaccccaagaactcaatcattctaacttacagaactact
cctgggacgttagcacgtttcctaattgataatccttctgaaaaagttacagaaatagag
ttgaggaaacgtgtgaagctggaagggaaagaacttgaagaatacttggaaaaagagaaa
ttaaagaaagaagctgctaaaaaacttgagcagtcaaaagagaccgatatagattccagt
gatgagagtgatgctgaggaagatattgatcagccatcggctcataagacaaaacacgac
ctgatgatgaaaggtgaaggcagtcgtaaaggaagtttcttcaaacaggctaaaaagtcc
taccctatgtttcctgccccagaagaaagaattaaatgggatgaatatggagaaattatc
aaaccagaggatttcttagtgccagaacttcaagccactgaagaagaaaaaagcaaatta
gaatctggcttgacaaatggagatgagcccatggatcaggatttatctgatgtgcccacg
aagtgcatttccatgacagagtctattgaaataaaagctagggttacttacatagactat
gaaggacgctctgatggggattccattaaaaagatcattaatcagatgaaaccacggcag
ttgatcattgtccacggacctccagaggccagtcaggatctcgcagagagctgccgcgca
tttggcgggaaagatattaaagtgtacatgccaaagctccatgaaactgtggacgccact
agtgagacgcacatctaccaggtgagattaaaagactcacttgttagctcccttcaattc
tgtaaggcaaaagatgctgaattagcttggatagatggtgtcttagacatgagagtttcc
aaagtggacacaggagttattttagaagaaggggaactaaaggatgatggagaagactca
gaaatgcaagtggatgccccttcagattctagcgtgatcgcacaacagaaggccatgaaa
agtctgtttggagatgatgagaaagaaacaggtgaagaaagtgagatcattcctactttg
gaacccttgccgccgaatgaggttcctggacatcagtccgtttttatgaacgaaccaaga
ctatcagacttcaaacaagttcttttacgggaggggattcaagccgaatttgtaggaggt
gtacttgtttgcaacaatcaagtagccgtccgaagaacagaaactggacgcattggatta
gaaggctgcctttgtcaagatttttataggataagagaccttttatatgaacagtatgcc
attgtataa
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