Rhinolophus hipposideros (lesser horseshoe bat): 308504480
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Entry
308504480 CDS
T12007
Symbol
LOC308504480
Name
(RefSeq) cytotoxic granule associated RNA binding protein TIA1-like isoform 1
KO
K13201
nucleolysin TIA-1/TIAR
Organism
rhii
Rhinolophus hipposideros (lesser horseshoe bat)
Brite
KEGG Orthology (KO) [BR:
rhii00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rhii03019
]
308504480 (LOC308504480)
03041 Spliceosome [BR:
rhii03041
]
308504480 (LOC308504480)
Messenger RNA biogenesis [BR:
rhii03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
308504480 (LOC308504480)
Spliceosome [BR:
rhii03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
308504480 (LOC308504480)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
RRM_Nup35
RRM_10
RRM_ACIN1
RRM_3
Calcipressin
XOO_2897-deam
Motif
Other DBs
NCBI-GeneID:
308504480
NCBI-ProteinID:
XP_080921332
LinkDB
All DBs
Position
11:complement(27149358..27151479)
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AA seq
386 aa
AA seq
DB search
MEDEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFYEHRHAA
AALAAMNGRKIMGKEVKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTE
DIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTN
WATRKPPAPKSTYESNTKQLSYDEVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQI
MEIRVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKCYWGKETLDMINPVQQQNQI
GYPQAYGQWGQWYGNAQQIGQYMPNGWQVPAYGMYGQAWNQQGFNQTQSSAPWMGPNYGV
QPPPGQNGSMLPNQPAGYRMAGYETQ
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atggaggatgagatgcccaagactctatatgttggtaacctttccagagatgtgacagaa
gctctaattctccagctctttagccagattggaccttgtaaaaactgcaaaatgattatg
gatacagctggaaacgatccatattgttttgtggaattttatgagcatcgtcatgcagct
gcagcactagctgctatgaatgggcggaagataatgggtaaggaagtcaaagtgaattgg
gcaacaacccccagcagtcaaaagaaagatacaagcagtagtaccgttgtcagcacacag
cgttcacaagatcatttccatgtctttgttggtgatctcagtccagaaattacaacagaa
gatataaaagctgcttttgcaccgtttggaagaatatcagatgcccgagtggtaaaagac
atggcaacaggaaagtctaagggatatggctttgtctcctttttcaacaaatgggatgca
gaaaacgccattcaacagatgggtggccagtggcttggtggaagacaaatcagaactaac
tgggcaacccgaaagcctccagctccaaagagtacatatgagtcaaacaccaaacagcta
tcatatgatgaggttgtaaatcagtctagtccaagcaactgtactgtctactgtggaggg
gtcacctctgggctaacagaacagctaatgcgtcagactttttcgccatttggacaaata
atggaaattcgagtctttccagataaaggatattcatttgttcggttcaattcccatgaa
agtgcagcacatgcaattgtgtctgttaatggaactaccatcgaaggccatgttgtgaaa
tgctattggggcaaagaaactctggatatgataaaccccgtgcaacagcagaatcaaatt
ggatatccacaagcttatggccagtggggccagtggtatggaaacgcacaacaaattggc
cagtatatgcctaacggttggcaagtacctgcatatggaatgtacggccaggcatggaac
cagcagggatttaatcagacacaatcttctgcaccgtggatgggaccaaattatggagtg
cagcctcctccaggacagaatggcagcatgttgcctaatcagcctgcagggtatcgaatg
gcagggtatgaaacccagtga
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