Rhinolophus hipposideros (lesser horseshoe bat): 308506364
Help
Entry
308506364 CDS
T12007
Symbol
TIA1
Name
(RefSeq) cytotoxic granule associated RNA binding protein TIA1 isoform 10
KO
K13201
nucleolysin TIA-1/TIAR
Organism
rhii
Rhinolophus hipposideros (lesser horseshoe bat)
Brite
KEGG Orthology (KO) [BR:
rhii00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rhii03019
]
308506364 (TIA1)
03041 Spliceosome [BR:
rhii03041
]
308506364 (TIA1)
Messenger RNA biogenesis [BR:
rhii03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
308506364 (TIA1)
Spliceosome [BR:
rhii03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
308506364 (TIA1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
RRM_Nup35
RRM_10
RRM_ACIN1
RRM_3
Calcipressin
XOO_2897-deam
Motif
Other DBs
NCBI-GeneID:
308506364
NCBI-ProteinID:
XP_080925867
LinkDB
All DBs
Position
12:27052542..27082872
Genome browser
AA seq
396 aa
AA seq
DB search
MEDEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFYEHRHAA
AALAAMNGRKIMGKEVKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTE
DIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTN
WATRKPPAPKSTYESNTKQLSYDEVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQI
MEIRVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKCYWGKETLDMINPVQQQNQI
GYPQAYGQWGQWYGNAQQIGQYMPNGWQVPAYGMYGQAWNQQGFKHNLLHRGWDQIMECS
LLQDRMAACCLISLQGIEWQGMKPSEKGLQNLKPVA
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atggaggatgagatgcccaagactctatatgttggtaacctttccagagatgtgacagaa
gctctaattctccagctctttagccagattggaccttgtaaaaactgcaaaatgattatg
gatacagctggaaacgatccatattgttttgtggaattttatgagcatcgtcatgcagct
gcagcactagctgctatgaatgggcggaagataatgggtaaggaagtcaaagtgaattgg
gcaacaacccccagcagtcaaaagaaagatacaagcagtagtaccgttgtcagcacacag
cgttcacaagatcatttccatgtctttgttggtgatctcagtccagaaattacaacagaa
gatataaaagctgcttttgcaccgtttggaagaatatcagatgcccgagtggtaaaagac
atggcaacaggaaagtctaagggatatggctttgtctcctttttcaacaaatgggatgca
gaaaacgccattcaacagatgggtggccagtggcttggtggaagacaaatcagaactaac
tgggcaacccgaaagcctccagctccaaagagtacatatgagtcaaacaccaaacagcta
tcatatgatgaggttgtaaatcagtctagtccaagcaactgtactgtctactgtggaggg
gtcacctctgggctaacagaacagctaatgcgtcagactttttcgccatttggacaaata
atggaaattcgagtctttccagataaaggatattcatttgttcggttcaattcccatgaa
agtgcagcacatgcaattgtgtctgttaatggaactaccatcgaaggccatgttgtgaaa
tgctattggggcaaagaaactctggatatgataaaccccgtgcaacagcagaatcaaatt
ggatatccacaagcttatggccagtggggccagtggtatggaaacgcacaacaaattggc
cagtatatgcctaacggttggcaagtacctgcatatggaatgtacggccaggcatggaac
cagcagggatttaaacacaatcttctgcaccgtggatgggaccaaattatggagtgcagc
ctcctccaggacagaatggcagcatgttgcctaatcagcctgcagggtatcgagtggcag
ggtatgaaacccagtgaaaaaggactccaaaatctaaagccagtggcttga
DBGET
integrated database retrieval system
