Rhinolophus hipposideros (lesser horseshoe bat): 308508586
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Entry
308508586 CDS
T12007
Symbol
LSM4
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm4 isoform 1
KO
K12623
U6 snRNA-associated Sm-like protein LSm4
Organism
rhii Rhinolophus hipposideros (lesser horseshoe bat)
Pathway
rhii03018
RNA degradation
rhii03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rhii00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
308508586 (LSM4)
09123 Folding, sorting and degradation
03018 RNA degradation
308508586 (LSM4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rhii03019
]
308508586 (LSM4)
03041 Spliceosome [BR:
rhii03041
]
308508586 (LSM4)
Messenger RNA biogenesis [BR:
rhii03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
308508586 (LSM4)
mRNA degradation factors
5'-3' decay
Lsm complex
308508586 (LSM4)
Spliceosome [BR:
rhii03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
308508586 (LSM4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
308508586
NCBI-ProteinID:
XP_080931575
LinkDB
All DBs
Position
16:complement(50093245..50103567)
Genome browser
AA seq
149 aa
AA seq
DB search
MTHPSCPPVDKLPLSLLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDG
DKFWRMPECYIRGSTIKYLRIPDEIIDMVKEEVVAKGRGRGGLQQQKQQKGRGMGGAGRG
VFGGRGRGGIPGTGRGQPEKKPGRQAGKQ
NT seq
450 nt
NT seq
+upstream
nt +downstream
nt
atgacacacccttcgtgtccaccggtggacaagctcccgttgtcactgctaaagacagct
cagaatcaccccatgttggtggagcttaaaaatggggagacgtacaacgggcacctggta
agctgcgacaactggatgaacatcaacttgcgtgaggtgatctgcacgtccagggacggg
gacaagttctggcggatgcctgagtgctacatccggggcagcaccatcaagtacctgcgc
atccccgacgaaatcatcgacatggtcaaagaagaggtggtggccaagggccgcgggcgt
ggtggcctgcagcagcagaagcagcagaagggccgaggcatggggggtgccggacgaggt
gtgtttggcggccggggccgaggcgggatcccgggcacgggcagagggcagccagaaaag
aagccaggcaggcaggcgggcaagcagtga
DBGET
integrated database retrieval system
