Rhinolophus hipposideros (lesser horseshoe bat): 308508858
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Entry
308508858 CDS
T12007
Symbol
LOC308508858
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm5
KO
K12624
U6 snRNA-associated Sm-like protein LSm5
Organism
rhii Rhinolophus hipposideros (lesser horseshoe bat)
Pathway
rhii03018
RNA degradation
rhii03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rhii00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
308508858 (LOC308508858)
09123 Folding, sorting and degradation
03018 RNA degradation
308508858 (LOC308508858)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rhii03019
]
308508858 (LOC308508858)
03041 Spliceosome [BR:
rhii03041
]
308508858 (LOC308508858)
Messenger RNA biogenesis [BR:
rhii03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
308508858 (LOC308508858)
mRNA degradation factors
5'-3' decay
Lsm complex
308508858 (LOC308508858)
Spliceosome [BR:
rhii03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
308508858 (LOC308508858)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
SM-ATX
LSM12_LSM
LSM14
Motif
Other DBs
NCBI-GeneID:
308508858
NCBI-ProteinID:
XP_080932389
LinkDB
All DBs
Position
16:57718343..57718844
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AA seq
91 aa
AA seq
DB search
MAANATTNPSQLLPLELVDKCIGSRIHIVMKSDKEIVGTLLGFDDFVNMVLEDVTEFEIT
PEGRRITKLDQILLNGNNITMLVPGGEGPEV
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atggcggctaacgctaccactaacccatcgcagctgctgccgctagagcttgtggacaaa
tgtataggatcaagaattcacattgtaatgaagagtgataaagaaattgttggcacgctt
ttaggatttgatgactttgtcaatatggtactggaagatgtcactgaatttgaaatcaca
ccagaaggaagaaggattactaaattagaccagattttgctaaatggaaataatataaca
atgctggttcctggaggagaaggacctgaagtatga
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