Rhizobium sp. K102: MHI61_05840
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Entry
MHI61_05840 CDS
T11457
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
rhik Rhizobium sp. K102
Pathway
rhik03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
rhik00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
MHI61_05840
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhik03400
]
MHI61_05840
DNA repair and recombination proteins [BR:
rhik03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
MHI61_05840
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ku
Motif
Other DBs
NCBI-ProteinID:
ULR42676
LinkDB
All DBs
Position
pRSpK102a:400306..401205
Genome browser
AA seq
299 aa
AA seq
DB search
MVAPRANWKGFIKFGEVAFPVALYTAASTSERIAFHTLNRKTGNRVRREFVDGETGDPVE
REDQVKGFEIEDGRYVVLEPEEVAAAVPESDKTLKVEAFIPWDEVDDVYFDKPYYLAPDT
MGSDAFKLLRDGMKKAKVAAIARTVLFRRLRTLLIRPLGKGLVGSTLNFDYEVRSSEKAF
EEMPDLKIEGEMLELAKHIINTKKGEFDPKEFDDRYEAAVAELVKAKIEGRTLPKKKAAP
AAKPNDLLQALRESAGMTTPAKTKRTAANANAGKSRQKAASASAPKSRSPGGAHQRRAG
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atggttgccccgagagcgaattggaaaggctttatcaagttcggggaggtcgctttcccc
gtggcgctctacaccgccgcctccacatccgagcggattgcgtttcacacgctgaacagg
aagaccggcaatcgggtgcgccgagaattcgtggacggtgagaccggcgatccggtcgaa
cgcgaggaccaggtcaaaggtttcgagatcgaagatggccgctacgttgtcctcgagccc
gaggaggtcgccgccgccgttcccgaaagcgacaaaacgctgaaggtggaggcgtttatt
ccttgggacgaggtcgacgacgtctatttcgacaagccttattatctggcccccgacacc
atgggcagcgacgctttcaagcttctgagggatggcatgaagaaggccaaggtcgcggcc
atcgcccggacggtgctgtttcggcgtttgcggacgcttctcatccgcccccttggcaaa
gggctggtcggctccactttgaacttcgactatgaagtccgctcctccgagaaggctttc
gaggagatgccggatctcaagatcgaaggcgagatgctggagcttgccaagcacatcatc
aacaccaagaagggcgagttcgatccgaaggaattcgacgaccgttacgaagcggccgtc
gccgaactggtgaaggcaaaaatcgaaggccgcactcttccgaagaaaaaggccgcgccg
gctgcgaaaccgaacgacctgttacaggcactgcgtgagagcgccggcatgacgacccca
gcaaagacgaagcgtaccgccgcaaatgccaatgccggcaagagcaggcagaaggccgca
agcgcatcggcgccgaaatctcgcagccccggcggcgctcaccagcgccgggccgggtga
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