Rhizobium sp. K102: MHI61_15345
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Entry
MHI61_15345 CDS
T11457
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
rhik Rhizobium sp. K102
Pathway
rhik03030
DNA replication
rhik03430
Mismatch repair
rhik03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rhik00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MHI61_15345 (dnaE)
03430 Mismatch repair
MHI61_15345 (dnaE)
03440 Homologous recombination
MHI61_15345 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rhik03032
]
MHI61_15345 (dnaE)
03400 DNA repair and recombination proteins [BR:
rhik03400
]
MHI61_15345 (dnaE)
Enzymes [BR:
rhik01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MHI61_15345 (dnaE)
DNA replication proteins [BR:
rhik03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MHI61_15345 (dnaE)
DNA repair and recombination proteins [BR:
rhik03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MHI61_15345 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DUF655
HROB
Motif
Other DBs
NCBI-ProteinID:
ULR46445
LinkDB
All DBs
Position
complement(1896993..1900490)
Genome browser
AA seq
1165 aa
AA seq
DB search
MADIVRASTGEAIGDTPGFIHLRIHSAYSLLEGALPLKKILYKAAGDNQPAIAITDTNNL
FVALEFSQKAMDDGLQPIIGCQVSIDMEDGLETEKRGGQQALVKLPSIVLLAATEAGYER
LVDLISRAYLGGEGNQAVHVRTSWLEEAGTEGLIALTGALTGPVDGAIREGHPAQAEARL
LMLKRLFGDRLYVELQRHGTYDKRHEQKIVGLAYAHDLPLVATNEAFFPTRDDYDAHDAL
MAVAHNAIVSDDSRFRLTPDHYLKSRAEMAKLFADLPEALENTIEIAKRCSFVLKTRKPI
LPRFTGATDDAEEAERAEAGELRRQAVEGLDMRLSTLGMSPGYEEKDYRERLEFELSVIE
RMRFPGYFLIVADFIKWAKQHDIPVGPGRGSGAGSLVAYALTITDVDPLRFSLLFERFLN
PERVSMPDFDIDFCQDRREEVIRYVQAKYGREQVAQIITFGSLQARAALRDVGRVLEMPY
GQVDKICKLVPNNPANPTPLSKAIEEEPKLQEEAAKEPVVARLLDIAQKIEGLYRHASTH
AAGIVIGDRPLSKLVPMYRDPRSDMPVTQFNMKWVEQAGLVKFDFLGLKTLTVLKVAVDF
VAKRGISVDLAAIPLDDKKTYEMLSRGETVGVFQVESAGMRKALIGMRPDCIEDIIALVA
LYRPGPMENIPTYNARKHGDEELESIHPMIDHLLKETQGVIVYQEQVMQIAQVLSGYSLG
EADLLRRAMGKKIKAEMDQQRERFVDGAVKNGVSKPQADNIFELLAKFANYGFNKSHAAA
YAIVSYQTAYMKAHYPVEFLAASMTLDMSNTEKVNDFRQDAKRLGIEVIAPSVQTSFRQF
ETGDNRIYYALAALKGVGESAVDHIVEVRGDKPFAGIEDFCLRIDPRQVNRRVLESLIFA
GAFDCFGMDRAQLSAGLDRILGYAQRAQENKLSGQSDIFGSTLTSGPEKISLPPFSPWLA
SERLLKEFQVLGFYLTAHPLDSYNNILQKMRVQTFAEFSAAIKQGASNARLAGTVISKQE
RKTRTGNKMGIIVFSDSSGQFEAVLFSEMLNQYRDMLESGKSFLLTATGEERPEGIGLRI
QTIQSLEEKSLQMQKALRVYVRDSGPLKMVAGHLNAKGDGLVSFIVIKEEGKREVEVALP
EKYRITPEIAAALRAAPGVVDVELV
NT seq
3498 nt
NT seq
+upstream
nt +downstream
nt
atggcggatatagtaagggcttcgacgggtgaggcgatcggcgacacgccgggcttcatt
cacctgagaatccattccgcctattcgcttctcgaaggcgcgctgccgctgaagaagatt
ctctacaaggcggccggagacaatcagccggccatcgcgattaccgacaccaacaatctg
ttcgtcgccctcgaattctcgcagaaggcaatggacgacgggctgcagccgatcatcggc
tgccaggtctcgatcgacatggaagacgggctggagaccgaaaaacgcggcggccagcag
gcattggtcaagctgccgtcgatcgttcttctcgcggccacggaggccggttacgaaagg
ctggtcgacctcatcagccgcgcctatctcggtggtgaaggcaatcaggccgtccatgtc
cgaacctcctggctggaggaggcgggcacggaagggctgatcgcgttgaccggtgccctg
acggggccggtcgatggggcgatcagggagggtcatcccgcccaggccgaagcgcggctg
ctcatgctgaagcgtctcttcggcgacaggctctatgtcgaactgcagcggcatggcacc
tacgacaagcggcacgagcagaagatcgtcgggctcgcctatgcccacgatctgccgctg
gtcgcgaccaacgaggccttctttccgacacgcgacgattacgacgcccatgatgcgctg
atggccgtcgcccataatgccatcgtctccgacgacagtcgctttcgcctgacgccggat
cactacctgaagagccgcgccgaaatggccaagctctttgccgatttgccggaagcgctg
gagaacacgatcgagatcgccaagcgctgctccttcgtattgaagacgcgcaaaccgatc
ctgccgcgtttcacgggtgcgaccgacgacgccgaggaggccgaacgcgccgaggcgggc
gaattgcgccgccaggcggtcgaagggctggacatgcggctttcgaccctcggcatgtcg
ccgggttatgaggaaaaggattatcgcgagcggctggaattcgagctcagcgtcatcgag
cgcatgcgctttcccggctacttcctgatcgttgccgacttcatcaaatgggccaagcag
catgacattccggttgggcctggccgcggttcgggcgccggttcgctggtcgcctacgcg
ctgacgatcaccgacgtcgatcccttgcggttttcgctgctgttcgaacgcttcctcaat
ccggagcgcgtgtcgatgccggacttcgacatcgacttctgccaggaccgccgcgaagag
gtgatccgatacgtccaggccaagtacggccgcgaacaggtggcccagatcatcaccttc
ggttcgctgcaggcgcgcgcagcactccgcgacgtcggccgcgtgctggagatgccctac
ggccaggtcgacaagatctgcaaactggtgccgaacaatccggccaatcccacgccgctc
tccaaggcgatcgaggaggagccgaagctgcaggaggaggcggcgaaggagccggtggtc
gcgcgcctgctcgatatcgctcagaagatcgagggactttaccgccatgcctcgacccat
gccgccggtatcgtcatcggcgaccgcccgctatccaagctcgtgccgatgtatcgcgat
ccgcgctccgacatgccggtcacccagttcaacatgaaatgggtggagcaggcgggcctg
gtcaaattcgacttcctcggcctgaagacgctgaccgtcctgaaggtcgccgtcgatttc
gtcgccaagcgcggcatcagtgtcgaccttgcggccattcccctggacgacaagaagacc
tatgagatgctgtcacgcggcgagacggtcggcgtgttccaggtggaaagtgccggcatg
cgcaaggcgctgatcggcatgaggccggactgcatcgaggacatcattgcgctggtggcg
ctctatcgtccgggtccgatggagaacatcccgacctacaacgcccgcaagcacggtgac
gaagagctggaatcgatccatccgatgatcgaccacctgctcaaggaaacccaaggggtc
atcgtctatcaggaacaggtgatgcagatcgcccaggtcctgtccggttattcgctcgga
gaagccgatcttttgcgccgcgccatgggtaagaagatcaaggctgagatggaccagcag
cgcgaacgcttcgtcgatggcgccgttaagaacggcgtatcgaagccgcaagccgacaat
atcttcgaactgctggcgaagttcgccaattacggcttcaacaagtcgcatgccgccgcc
tacgccattgtctcctaccagacggcctatatgaaggcgcattatccggttgaattcctc
gccgcctcgatgacgctcgacatgtccaacacggaaaaggtcaacgacttccgccaggac
gccaagcgcctcggcatcgaggtgatcgccccgtcggtgcagacttccttccgccagttc
gaaaccggcgacaaccgcatctattatgcgctcgccgctctcaagggcgttggcgaatcc
gccgtcgaccatatcgtcgaggtgcgcggcgacaagccctttgccggcatcgaggatttc
tgcctgcgcatcgacccgcgccaggtcaaccgccgcgtgttggaaagcctgatctttgcc
ggtgccttcgattgtttcggtatggatcgcgcccagctttcggccggcctcgaccgtatc
cttggttacgcccagcgcgcccaggagaacaagctgagcgggcagtcggatattttcggc
agcacgctaacgtccgggcctgagaagatctccctgccgccgttttcgccctggcttgcc
tctgagcggctgctcaaggagttccaggtgctgggcttctatctcaccgcccacccgctc
gattcctacaacaacatcctacagaagatgcgggtacagacctttgccgaattttccgca
gcgatcaaacagggcgcgtccaatgcgcgccttgccggcaccgtcatctccaagcaggag
cgcaagacccgcaccggcaacaagatgggcatcatcgtcttttcggattcgtcgggccag
ttcgaagccgtgctgttttcggaaatgctgaaccagtaccgcgacatgttggagtccgga
aaatccttcctgctgaccgcgaccggcgaggaacggccggagggcatcggtctgcgcatc
cagacgatccagtcgctggaggagaagtcgctgcagatgcagaaggcgctgcgcgtctat
gtccgcgattccggaccgctgaaaatggttgccggccatttgaacgccaagggcgacggc
ctggtttccttcatcgtcatcaaggaagagggcaagcgcgaggtcgaagtggcgctgccg
gagaaataccgcatcacaccggagatcgccgccgcccttcgcgctgcccccggcgtcgtc
gacgtcgagctggtgtga
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