Rhizobium sp. K102: MHI61_15380
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Entry
MHI61_15380 CDS
T11457
Name
(GenBank) ribonuclease J
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
rhik Rhizobium sp. K102
Pathway
rhik03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rhik00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MHI61_15380
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rhik03019
]
MHI61_15380
Messenger RNA biogenesis [BR:
rhik03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
MHI61_15380
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NCBI-ProteinID:
ULR46452
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Position
complement(1906312..1907982)
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AA seq
556 aa
AA seq
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MAKQDELVFLPLGGVGEIGMNLALYGYGPPEHRQWIMVDCGVTFPGPDLPGVDLVLPDIR
FLASERKNLKAIIITHAHEDHYGALADLWPGLNVPVYASGFTAGLLEAKRNFEKARIAEV
PVTPFKAGDTINVGPFSIEGVAVNHSIPEPMSLMIRTPAGNVIHTGDWKIDHEPSLGPLT
DETRFRQLGDEGVLALMCDSTNALRDGVSPSEKDVSESLRKIIEDAEGRVAITTFSSNVG
RIRTVAEAAEAAGREVLLLGSSLKRVVDVAQDIGLMEGVKPFISEEEYGYIPRDKVVVIL
TGSQGEARAALAKLSRDEMRNVAFAAGDIVVFSSRAIPGNEKAIQDIKNGLVEQGVHIIT
DTEALVHVSGHPRRNELQRMYEWTRPKVVVPVHGEATHLTAHKELAEQSGIAIVPRVRNG
DILRLAPGPVEVIGEAPHGRIYKDGMLIGDFDEMGIGERKKLSYVGHVAVSVVLDARYDI
VGDPDLVSIGLPVYDDEGDEMEDTLFDAAISAIESIPRARRKDIDMLQEAVRRAIRAAAN
QSWGKKPVVTAFVTKV
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaacaggacgagttggtattcctgcctctgggcggcgttggcgagatcggcatg
aatctcgctctctatggctacggcccgcccgagcatcgccagtggatcatggtcgattgc
ggcgtcacctttcccggcccggatctgccgggcgtcgacctggtcctgcccgacatccgc
ttcctcgccagcgaacgcaaaaacctcaaggcgatcatcatcacccatgcccatgaagat
cattatggcgcactcgccgatctctggcccgggctcaacgtgccggtctatgcctcgggc
tttaccgcgggtctgctcgaagccaaacgtaatttcgagaaggcgaggatcgccgaggtg
ccggtgacgccgttcaaggcgggcgacacgatcaatgtcggcccgttcagcatcgaaggt
gtggccgtcaatcactcgatccccgagccgatgtcgctgatgatccgcacgcctgccggc
aatgtcatccacaccggcgactggaagatcgaccacgagccctcgctcgggccgctgacc
gatgagacgcgctttcgccagttgggcgacgagggcgtgctggcgctgatgtgcgattcc
accaatgccttgcgtgacggtgtttcgccgtccgagaaggatgtgtccgagagcctccgc
aagatcatcgaggatgccgaaggccgggtggcgatcaccaccttctcatcgaatgtcggg
cgcattcgcaccgttgccgaagctgccgaggcggcgggccgcgaagtgctgctgctcggc
agctcgctgaagcgcgtcgtcgacgtcgcccaggatatcggcctgatggaaggcgtgaag
cccttcatctccgaggaagaatacggctacatcccccgcgacaaggtcgtcgtcatcctg
accggcagccagggcgaggcgcgggcagcgcttgccaagctttcccgcgacgaaatgcgc
aatgtggcctttgcggcaggcgatatcgtcgtcttttcctctcgcgccattcccggtaac
gagaaggcgatccaggacatcaagaacggcctcgtcgagcagggcgtgcacattatcacc
gatactgaagccctggtccacgtgtccggccatccgcgccgcaacgagctgcagcggatg
tacgagtggactcggccgaaggtcgttgtgccggtgcatggcgaggcgacgcatctgacg
gcgcacaaggagcttgccgagcaatccggcatcgcgatcgtcccgcgggtgcgcaacggc
gatatcctgcggctggcgccaggtccggtcgaggtgatcggcgaagcgccgcacggccgc
atctacaaggacggcatgctgatcggcgatttcgacgagatggggatcggcgagcgcaag
aagctctcctatgtcggccatgtcgcggtcagcgtcgtgctcgacgcccgttatgatatt
gtcggcgatcccgatctcgtctcgatcggcctgccggtctatgacgacgagggcgatgag
atggaggacacgctcttcgacgcggcgatcagcgccatcgaaagcattccgcgcgcccgc
cgcaaggatatcgacatgctgcaggaggccgtgcgccgcgccatccgcgccgctgcgaac
cagagctggggcaagaagcccgtcgttaccgccttcgtcaccaaggtgtga
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