Rhizobium sp. K102: MHI61_15860
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Entry
MHI61_15860 CDS
T11457
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
rhik Rhizobium sp. K102
Pathway
rhik00521
Streptomycin biosynthesis
rhik00523
Polyketide sugar unit biosynthesis
rhik00525
Acarbose and validamycin biosynthesis
rhik00541
Biosynthesis of various nucleotide sugars
rhik01100
Metabolic pathways
rhik01110
Biosynthesis of secondary metabolites
rhik01250
Biosynthesis of nucleotide sugars
Module
rhik_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
rhik00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
MHI61_15860 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
MHI61_15860 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
MHI61_15860 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
MHI61_15860 (rfbB)
00525 Acarbose and validamycin biosynthesis
MHI61_15860 (rfbB)
Enzymes [BR:
rhik01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
MHI61_15860 (rfbB)
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Ortholog
Paralog
GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
3Beta_HSD
Polysacc_synt_2
RmlD_sub_bind
NAD_binding_4
adh_short
KR
NmrA
NAD_binding_10
Motif
Other DBs
NCBI-ProteinID:
ULR46535
LinkDB
All DBs
Position
2001889..2002941
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AA seq
350 aa
AA seq
DB search
MRILVTGGAGFIGSALVRHLVNEIGAEVLNVDALTYAGNLASLKSVEAAPNYQFLRADIR
DRARMQEAFASFRPDVAMHLAAESHVDRSISGADDFIQTNIVGTYSLLDAARHYWDGLDA
HRKNAFRFLHVSTDEVYGSLGDEGLFEETTPYDPSSPYSASKAASDHLAIAWHRTYGLPV
VVSNCSNNYGPFHFPEKLIPLMILNALEGKPLPVYGNGANVRDWLYVEDHARALYTIASR
GRPGEKYNVGGRNERRNIDVVHRICAILDGVYNDKAPHARLITNVTDRPGHDARYAIDAS
KLESELGWKAQETFETGIEKTVRWYLDNEWWWRPLRETVYSGERLGVFKG
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatactggtcacgggcggagcgggcttcatcggatcggctttggtgcgccatctg
gtcaacgagatcggcgccgaagtgctgaatgtcgatgcgctaacctatgccggcaatctg
gcatcgctgaaatccgtcgaagcggcgccgaactaccaatttctgcgcgccgacatccgc
gaccgcgccaggatgcaggaagcattcgcgtccttccgccctgatgtcgccatgcatctc
gcggccgagagccatgtcgaccgctcgatctcgggcgcggatgatttcattcagaccaac
atcgtcggcacatacagcctgctggatgccgcgcggcactattgggatgggcttgacgct
caccgcaagaacgccttccgctttctgcatgtctcgacggacgaggtttacggctcgctc
ggcgacgagggtctcttcgaggaaacgacgccctacgatccgtcctcgccctactccgcc
tccaaggccgcgagcgatcatctggcgatcgcctggcaccgcacctacggcctgcccgtc
gtcgtctccaattgctccaacaattacggcccgttccatttcccggaaaagctcattccg
ctgatgatcttgaacgcactcgagggtaagcctcttccggtttatggcaacggcgcaaat
gttcgcgactggctttatgtcgaggaccatgcccgcgcgctctacacaatcgcatcaaga
gggcgccccggcgaaaaatacaatgtgggcggccgcaatgagcgcaggaacattgatgtc
gttcatcgcatctgcgcgattctcgacggcgtctacaatgacaaggcaccgcatgcgcgt
ctgatcaccaacgtcacggaccgccccggacacgacgcgcgctatgcgatcgacgcctcg
aaactcgaaagcgaactcggctggaaggcccaagagaccttcgaaaccggcatcgagaag
accgtgcgctggtacttggataacgaatggtggtggaggccgctgcgcgaaaccgtctat
tccggcgaacgcctcggcgttttcaaggggtga
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