Rhizobium sp. K102: MHI61_23205
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Entry
MHI61_23205 CDS
T11457
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
rhik Rhizobium sp. K102
Pathway
rhik03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rhik00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MHI61_23205 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rhik03019
]
MHI61_23205 (pnp)
03016 Transfer RNA biogenesis [BR:
rhik03016
]
MHI61_23205 (pnp)
Enzymes [BR:
rhik01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
MHI61_23205 (pnp)
Messenger RNA biogenesis [BR:
rhik03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
MHI61_23205 (pnp)
Transfer RNA biogenesis [BR:
rhik03016
]
Prokaryotic type
tRNA degradation factors
MHI61_23205 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
KH-I_KHDC4-BBP
OB_RRP5_4th
Motif
Other DBs
NCBI-ProteinID:
ULR44034
LinkDB
All DBs
Position
3475401..3477539
Genome browser
AA seq
712 aa
AA seq
DB search
MFDTHTVEIEWAGRPLKLETGKIARQADGAVLATYGETVVLATVVSAKAPKPGQDFFPLT
VNYQEKTYAAGKIPGGYFKREGRPSENETLVSRLIDRPIRPLFPEGYKNDTQVVVTVIQH
DLENNPDILSMVATSAALTLSGVPFMGPVGGARVGYINGEYVLNPHLDEMDESSLDLVVA
GTYDAVLMVESEAKELPEDVMLGAVMFGHRGFQPVLDAIIKLAEVAAKEPRDFQPEDYSA
LETEMLGLAEAELRQAYKITQKADRYAAVDAVKAKVKAHFLPEEGEARYTAEEVGAIFKH
LQAKIVRWNILDTKSRIDGRDLETVRPIVSEVGLLPRTHGSALFTRGETQAIVVATLGTG
EDEQYVDSLTGMYKERFLLHYNFPPYSVGETGRMGSPGRREIGHGKLAWRAIRPMLPSAE
QFPYTLRVVSEITELNGSSSMATVCGTSLALMDAGVPLAKPVAGIAMGLILEGDRFAVLS
DILGDEDHLGDMDFKVAGTADGITSLQMDIKIAGITEEIMKVALSQAQGGRTHILGEMSK
AITESRGQLGEFAPRIEVMNIPVDKIREVIGSGGKVIREIVEKTGAKINIEDDGTVKIAS
SSGKEIEAARKWIHSIVAEPEIGQIYEGTVVKTADFGAFVNFFGARDGLVHISQLASERV
AKTQDVVKEGDKVWVKLLGFDERGKVRLSMKVVDQATGQEIANEKKKEEAAE
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atgtttgatacacacaccgtggaaatcgagtgggccggccgcccgctgaaacttgaaacc
ggcaagatcgcccgtcaggccgacggcgccgttctcgccacctacggcgaaaccgtcgtt
ctcgccaccgtcgtttcggccaaggcaccgaagcccggccaggacttcttcccgctgacc
gtcaactaccaggaaaagacctacgcagccggcaagatccccggcggctatttcaagcgc
gagggacgcccgagcgaaaacgagacgctcgtttcccgcctgatcgaccgcccgatccgc
ccgctcttcccggaaggctacaagaacgacacgcaggtcgtcgtcaccgtcatccagcac
gaccttgaaaacaaccccgacatcctgtcgatggtcgcgacctcggcagcgctgacgctc
tccggcgttcccttcatgggcccggtcggcggtgcgcgcgtcggctacatcaatggcgaa
tatgttcttaacccgcatctcgacgagatggacgagtcgagcctcgacctcgtcgtcgcc
ggcacctacgacgccgtgctgatggtcgaatccgaagccaaggaactgcccgaggacgtc
atgctcggcgccgtcatgttcggccacaggggtttccaaccggttctcgacgcgatcatc
aagctcgccgaagttgccgccaaggagccgcgcgacttccagccggaagactattccgct
ctcgaaaccgagatgctcggccttgccgaagctgaacttcgccaagcctacaagatcact
cagaaggccgaccgctacgccgccgtcgacgccgtcaaggcgaaggtgaaggcccacttc
ctccccgaggaaggcgaagcccgctacacggccgaggaagtcggcgcgatcttcaagcac
ctgcaggccaagattgtccgctggaacattctcgacaccaagagccgtatcgacggccgc
gacctcgaaaccgttcgtccgatcgtttcggaagtcgggcttctgccgcgcacccatggt
tcggcgctgttcacccgaggcgaaacccaggcgatcgtcgttgccacgctcggcaccggc
gaagacgaacaatatgtcgacagcctgacgggcatgtacaaggagcgcttcctgctccat
tacaacttcccgccctactccgtcggcgagaccggccgcatgggctccccgggccgccgc
gaaatcggccacggcaagctcgcatggcgcgcgatccgtccgatgctgccgtcggccgag
cagttcccctacacgctgcgcgtcgtctccgagatcaccgagttgaacggctcgtcctcg
atggcgaccgtctgcggcacctcgctcgctctgatggacgccggcgttccgctggccaag
ccggttgccggtatcgccatgggcctcatcctcgaaggtgatcgcttcgctgttctctcc
gacatcctcggtgacgaagaccacctcggagacatggacttcaaggttgcaggtacggcc
gacggcatcacctcgctgcagatggacatcaagatcgccggtatcaccgaagagatcatg
aaggtcgcgctcagccaggcccagggcggccgcacccacattctcggtgaaatgtccaag
gcgatcaccgaaagccgcggccagctcggcgaattcgctccgcgcatcgaagtcatgaac
attccggtcgacaagatccgcgaagtcatcggctccggcggcaaggtcatccgcgaaatc
gtcgaaaagaccggtgcgaagatcaacatcgaggacgacggcaccgtcaagatcgcctcc
tcttccggcaaggaaatcgaagcggcccgcaagtggatccactcgatcgttgccgagcct
gaaatcggccagatctacgaaggcactgttgtcaagaccgccgacttcggcgccttcgtc
aacttcttcggcgcccgcgacggcctcgtccatatctcgcagctcgcttccgagcgtgtt
gccaagacgcaggacgtcgtcaaggaaggcgacaaggtctgggtcaagctgctcggcttc
gacgaacgcggcaaggttcgcctgtcgatgaaggtcgtcgaccaggccaccggccaggag
atcgcgaacgagaagaagaaggaagaagcggccgaataa
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