KEGG   Rhizobium sp. K102: MHI61_23825
Entry
MHI61_23825       CDS       T11457                                 
Symbol
rho
Name
(GenBank) transcription termination factor Rho
  KO
K03628  transcription termination factor Rho
Organism
rhik  Rhizobium sp. K102
Pathway
rhik03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:rhik00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    MHI61_23825 (rho)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:rhik03021]
    MHI61_23825 (rho)
   03019 Messenger RNA biogenesis [BR:rhik03019]
    MHI61_23825 (rho)
Transcription machinery [BR:rhik03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription termination factor
     MHI61_23825 (rho)
Messenger RNA biogenesis [BR:rhik03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     MHI61_23825 (rho)
SSDB
Motif
Pfam: Rho_RNA_bind ATP-synt_ab Rho_N OB_RNB AAA_22 AAA_25 NACHT S1CSD-TOTE-2 AAA
Other DBs
NCBI-ProteinID: ULR44141
LinkDB
Position
3608096..3609361
AA seq 421 aa
MAEMKLQELKSKSPTDLLAFAKSLEVENASTMRKQELMFAILKMLASQDVEIIGEGVVEV
LQDGFGFLRSANANYLPGPDDIYISPSQIRRFSLKTGDTVEGPIREPKEGERYFALLKVN
TINFDDPEKIRHKVHFDNLTPLYPNERFKMELDIPTSKDLSPRVIDLVAPLGKGQRGLIV
APPRTGKTVLLQNIAHSITANHPECYLIVLLIDERPEEVTDMQRSVRGEVISSTFDEPAV
RHVQVAEMVIEKAKRLVEHGRDVVILLDSITRLGRAYNTVVPSSGKVLTGGVDANALQRP
KRFFGAARNIEEGGSLTIIATALIDTGSRMDEVIFEEFKGTGNSEIVLDRKVADKRIFPA
MDILKSGTRKEDLLVPRQDLQKIFVLRRILAPMGTTDAIEFLIDKLKQTKNNSDFFNSMN
T
NT seq 1266 nt   +upstreamnt  +downstreamnt
atggctgaaatgaagcttcaggaacttaagagcaaatccccgacggatcttctggctttt
gccaaatcgctcgaggtcgagaatgcaagcacgatgcgcaaacaggaattgatgtttgcg
atcctcaagatgctggccagccaggatgtggagatcatcggcgaaggggtggtcgaggtg
ctgcaggacggcttcggcttcctgcgctcggccaacgccaactacctgcccggccctgac
gatatttatatctcgccgtcgcagatccgccgtttctctttgaagacaggcgacacggtc
gagggaccgatccgtgaaccgaaggaaggcgagcgctatttcgcgctgctcaaggtcaac
accatcaatttcgacgatccggaaaagatccgtcacaaggttcatttcgacaatctgaca
ccgctctatccgaatgagcgcttcaagatggaactcgacattccgacctccaaggatctg
tcgccccgcgtgatcgatctggtggcgccgctcggcaagggccagcgcggattgatcgtc
gcgccgccgcgcaccggtaagaccgtccttctgcaaaacatcgcccattcgatcacggcc
aaccacccggaatgctatctcatcgtccttctgatcgacgaacgtccggaggaagtgacg
gacatgcagcgttccgtccgcggtgaggtcatttcctccaccttcgacgaaccggcggtg
cgtcacgtccaggtggccgaaatggtgatcgaaaaggccaagcgtctcgtcgagcatggc
cgcgacgtcgtcattctgctcgattcgatcacacgcctcgggcgcgcctacaacacggtc
gtcccctcctccggcaaggtgctgacgggtggtgtcgacgccaacgcgctgcaacggccg
aagcgcttcttcggcgccgcgcgcaacattgaggaaggtggttctctgaccatcatcgca
acggcgctgatcgataccggtagccgcatggacgaagtgatcttcgaagagttcaagggt
accggcaactcggaaatcgtcctcgaccgcaaggtcgccgacaagcggatcttcccggcg
atggacatcctcaagtccggcacgcgtaaggaagacctgctcgttccacgccaggatctg
cagaagatcttcgttcttcgccgtatcctcgctccaatgggcaccaccgatgcgatcgaa
ttcctgatcgacaagctgaagcagacgaagaacaattctgatttctttaactcgatgaac
acctaa

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