KEGG   Rhizobium sp. 32-5/1: P6U16_01985
Entry
P6U16_01985       CDS       T11601                                 
Name
(GenBank) sigma-54 dependent transcriptional regulator
  KO
K13599  two-component system, NtrC family, nitrogen regulation response regulator NtrX
Organism
rhio  Rhizobium sp. 32-5/1
Pathway
rhio02020  Two-component system
Brite
KEGG Orthology (KO) [BR:rhio00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    P6U16_01985
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:rhio02022]
    P6U16_01985
Two-component system [BR:rhio02022]
 NtrC family
  NtrY-NtrX (nitrogen regulation)
   P6U16_01985
SSDB
Motif
Pfam: Sigma54_activat Response_reg AAA_lid_14 Sigma54_activ_2 HTH_8 AAA_5 Mg_chelatase AAA_2 MCM AAA AAA_16 P-loop_TraG nSTAND3
Other DBs
NCBI-ProteinID: WEZ83622
LinkDB
Position
complement(391172..392536)
AA seq 454 aa
MAADILVVDDEEDIREIVSGILSDEGHETRTAFDSDSALAAIGDRLPRLVFLDIWMQGSR
LDGLALLDEIKSRHPDLPVVMISGHGNIETAVSAIRRGAYDFIEKPFKADRLILIAERAL
ENSKLKKEVSELKKRSGDPVELIGTSVAVSQLRQTIEKVAPTNSRIMIQGPSGSGKELVA
RMIHRKSSRANGPFVALNAAAITPDRMEVALFGTEATPGQPRRTGALEEAHSGILYLDEV
GEMPRETQNKILRVLVDQQFERVGGSKRVKVDVRIISSTAYNLESQIAEGAFREDLYHRL
AVIPVRVPALAERREDIPFLVDMFMRQISEQAGIRSRKIGEDALAVLQAHGWPGNIRQLR
NNIERLMILARSDGPDTPISADMLPTEVGDSLPKISTQGDHHIMTLPLREAREMFERDYL
IAQINRFGGNISRTAEFVGMERSALHRKLKSLGV
NT seq 1365 nt   +upstreamnt  +downstreamnt
atggccgctgatattctggttgtggatgacgaggaggacattcgcgaaatcgtctcgggc
atcctgtctgacgaaggacacgaaacccgcaccgcgttcgatagcgacagtgcgctggcg
gcgattggcgatcggctgccgcggctggtgtttctcgacatctggatgcagggcagccgg
ctggacgggctggcgctgctggacgagatcaagagccggcatcccgacctgccggtggtg
atgatttccggccatggcaatatcgagacggcggtctctgccattcgccgcggtgcctat
gatttcatcgaaaagcccttcaaggccgaccgcctgattctcatcgccgagcgggcgctg
gaaaactccaagctcaagaaggaagtctccgaactgaagaagcggtccggggatcctgtt
gaactgatcgggacgtcggtcgcggtctcgcaactgcgccagacgatcgaaaaggtcgcg
ccgaccaacagccggatcatgatccaggggccgtccggctccggcaaggaactggtcgcc
cgcatgattcaccgcaagtcgtcgcgcgccaatggcccgttcgtggcgctgaacgcggcg
gcgatcacgccggatcgcatggaggtggcgctgttcggcaccgaggcgacgccgggacag
ccgcgccgcaccggtgcgctcgaagaggcgcatagcggcatcctctatctcgacgaagtc
ggtgaaatgccgcgggagacccagaacaagatcctgcgtgtcctggtcgaccagcagttc
gaacgcgtcggcggctccaagcgcgtcaaggttgacgtgcggatcatctcctcgaccgcc
tataacctcgaaagccagatcgccgaaggtgccttccgcgaggatctctatcaccggttg
gccgtcatccccgtccgcgttccggcgcttgccgagcgtcgcgaggacattcccttcctg
gtcgatatgttcatgcgccagatcagcgagcaggcgggtatccggtcccgcaagatcggc
gaggacgcgctggccgtgctgcaggcccatggttggcccggcaatatccggcagttgcgc
aacaatattgaacggttgatgattcttgcccgcagcgacggtcctgacacgccgatttcc
gccgacatgctgccgaccgaagtcggcgatagcctgccgaagatttcgacgcagggcgat
catcacatcatgacgctgcctttgcgcgaggcgcgcgaaatgttcgaacgcgattatctg
attgcccagatcaaccggtttggcggcaatatttcgcgtacggcggaattcgtcggcatg
gagcgttcggccctgcaccgcaagctgaaatcgctgggcgtataa

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