KEGG   Rhizobium sp. 32-5/1: P6U16_11645
Entry
P6U16_11645       CDS       T11601                                 
Symbol
rho
Name
(GenBank) transcription termination factor Rho
  KO
K03628  transcription termination factor Rho
Organism
rhio  Rhizobium sp. 32-5/1
Pathway
rhio03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:rhio00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    P6U16_11645 (rho)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:rhio03021]
    P6U16_11645 (rho)
   03019 Messenger RNA biogenesis [BR:rhio03019]
    P6U16_11645 (rho)
Transcription machinery [BR:rhio03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription termination factor
     P6U16_11645 (rho)
Messenger RNA biogenesis [BR:rhio03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     P6U16_11645 (rho)
SSDB
Motif
Pfam: Rho_RNA_bind ATP-synt_ab Rho_N OB_RNB AAA_22 AAA_25 S1CSD-TOTE-2 NACHT AAA DUF6360 Fungal_virus_P2_C
Other DBs
NCBI-ProteinID: WEZ81926
LinkDB
Position
2265315..2266580
AA seq 421 aa
MAEMKLQELKNKTATDLLAFAESVEVENASVMRKQELMFAILKMLASQDVEIIGEGVVEV
LQDGFGFLRSANANYLPGPDDIYISPSQIRRFSLKTGDTVEGPIRGPKEGERYFALLKVN
TINFEDPEKIRHKVHFDNLTPLYPNERFKMELEVPTSKDLSARVIDLIAPLGKGQRGLIV
APPRTGKTVLLQNIAHSITANHPECYLIVLLIDERPEEVTDMQRSVKGEVVSSTFDEPAT
RHVQVAEMVIEKAKRLVEHGRDVVILLDSITRLGRAYNTVVPSSGKVLTGGVDANALQRP
KRFFGAARNIEEGGSLTIIATALIDTGSRMDEVIFEEFKGTGNSEIVLDRKVADKRIFPS
MDILKSGTRKEDLLVPRQDLQKIFVLRRILAPMGTTDAIEFLIDKLKQTKTNGDFFDSMN
T
NT seq 1266 nt   +upstreamnt  +downstreamnt
atggctgaaatgaagctacaagaacttaaaaacaagaccgctaccgatcttctggctttt
gccgaatcggtcgaggtcgagaatgccagcgtcatgcgcaagcaggagctgatgtttgcg
atcctcaagatgcttgccagtcaggatgtggaaatcatcggtgaaggcgtcgttgaggtg
cttcaggacggtttcggtttcctgcgctcggcgaatgcaaactatctgcctggcccggac
gatatctacatctctccatcgcagatccgccgcttctcactgaagaccggtgatactgtc
gaaggaccgatccgcggtccaaaggaaggcgaacgctatttcgctctgctcaaggtcaat
acgatcaattttgaagatcccgaaaaaatccgccacaaggtccacttcgataatctgacg
ccgctctatccgaacgagcgcttcaagatggaacttgaggttccgacatcaaaggacctg
tcggcacgcgtgattgacctgatcgccccgctcggtaaaggccaacgcggcctcatcgtc
gcaccaccgcgcaccggtaagacagttctcctgcagaacatagcgcattcgatcactgcc
aatcatccggaatgctatctgatcgtcctgctcattgacgagcggccggaagaagtgacc
gacatgcagcgctcggtgaagggtgaagttgtctcctcgacctttgacgaaccagcaacg
cgccacgtgcaagttgcggagatggtcatcgaaaaggccaagcgcctggtcgagcacggc
cgcgacgttgtgatcctgcttgattccatcacgcgtcttggccgcgcctacaacacggtc
gttccgtcgtcgggcaaggtgctgacgggcggtgtggatgcgaatgcgctccagcggccg
aagcgcttctttggtgctgcccgtaatatcgaggaaggcggctcgctgacgattattgcg
accgccctgatcgataccggcagccgcatggacgaagtcatcttcgaagagttcaagggc
accggcaactccgaaatcgtcctcgatcgcaaggtcgccgacaagcgcatcttcccgtcg
atggatattctcaagtccggtacccgtaaggaagatctactggttccgcgccaggatctt
cagaagatctttgttcttcgccgaattcttgcgccgatgggcacaacggatgctattgaa
ttcctgatcgacaagctaaagcagacgaagacgaacggcgatttcttcgactccatgaat
acctga

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