Rhizobium sp. Pop5: NE852_04255
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Entry
NE852_04255 CDS
T11439
Name
(GenBank) type I secretion system permease/ATPase
KO
K11004
ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
Organism
rhip Rhizobium sp. Pop5
Pathway
rhip02010
ABC transporters
rhip03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
rhip00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
NE852_04255
03070 Bacterial secretion system
NE852_04255
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rhip02000
]
NE852_04255
02044 Secretion system [BR:
rhip02044
]
NE852_04255
Transporters [BR:
rhip02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
NE852_04255
Secretion system [BR:
rhip02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
NE852_04255
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Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
UVD57428
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Position
422609..424756
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AA seq
715 aa
AA seq
DB search
MDGVISQHLDSGLRALCGIAAFYRIAADPALLQHDLALKGRSSEAVDIQRAAKIIGLKAR
VVEKVTEQRLRTMPVPAIVKVRSGTFHVFAGLNPSGKYRLVDPITRVDREIARSDILAEI
DARVILVGRRIRGEGSDPREFGFKWFLPSIWRYRKPLAHVLLASLFVQIFALITPLFFQV
VVDKVLTHKGYSTLFVLVAGIAIVGLFDVMLQYLRAYALAHTTNRIDVELGQRLFHHLLR
LPLEYFETRSAGQTVARVRELETIRAFLTGQGLFSALDVVFTFVFIAVLFAYSWSLTLIV
IAAIPIYILIGSVVRPPLREFIKEKFNRGAASQQFLVEAIVGIHTVKSAAVEPVMQAQWE
EKLAAYVRTAFDTTLLGVGGQNAIQYVSKLSTAALLLFGARAVIEGELSVGSLVAFNMIA
GQVTQPILRLSQLWQDFQQVQISVDRLGDILNTPTERQPAARLSLPAPKGKIDFRNITFR
YRPGSPEVLKNISLEIKPGEVIGIVGTSGSGKSTLAKLVQRLYIPEEGQVLLDGMDLSQL
DPAWLRSHIGVVLQENLLFNRTIHDNIAFSNPAMQRAQVIAVAKLAGADEFILRMPHGYD
TMIEERGANLSGGQRQRIAIARALATAPPILIFDEATSALDYESERVVQTNMRQIAAGRT
VIIIAHRLAAVRPCNRIIGMAGGRIVEVGSHDDLLKRPEGLYARLWALQNDRGAA
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atggatggcgtcatttcgcagcacctggactccggtcttcgtgcgctctgtggcatcgct
gcgttctatcgaattgctgccgacccggctctactgcagcacgacctggcgctgaagggg
cgctcgtccgaagccgttgatattcagagagctgccaagattatcggactcaaggcgcgt
gtcgtggagaaggtcacggagcaacggcttcgaaccatgccagtccccgccatcgtcaaa
gtgcgcagcggaacctttcatgtattcgccgggttgaatccatccggtaagtacagactt
gtcgatccgataacgcgcgttgatcgcgaaattgctcggtccgatatattggccgaaatc
gacgcgcgcgttattctcgtggggcggcgtataaggggcgaagggtccgatccgcgagag
ttcggattcaaatggtttcttccatcgatctggcgttatcgaaagccgcttgcgcatgta
ttgctcgcctcgctgtttgtgcagatctttgcgctcatcacgcctttgttctttcaggtt
gtggtcgacaaggtgctgacgcataagggttattcgacgctatttgtgcttgttgccggt
atcgcgatcgtcggcctcttcgatgtcatgctccaatatctgagagcctatgcactggct
cacacgacgaaccggatcgacgtcgagctcggccaacgcctgttccatcatctgctgcgg
ctgccactggagtatttcgagacgcggtctgccggccagactgtcgcccgcgttcgcgaa
cttgaaaccattcgcgcattcctgaccggacagggactgttttcggccctcgatgtcgtg
ttcacatttgtcttcatcgcggttcttttcgcttattcctggagcttgacgctgatcgtc
atcgccgccatcccgatctacatcctgatcggaagcgtggtgcgaccgccactgcgcgaa
ttcatcaaggagaagttcaatcggggcgcggcaagccagcagttcctcgtcgaagccatc
gtcggtatccacacggtaaagtccgccgcggtagagccggtgatgcaggcgcagtgggag
gagaagctcgcagcttacgtgcgaacagccttcgatacgacattgcttggcgtcggcggg
caaaacgccattcaatatgtgagcaagctttctacggccgcccttcttcttttcggtgcg
agggcggtcatcgaaggcgagctttccgttggttctctcgtcgccttcaacatgattgcc
ggccaggtcacccagccgatcttgaggctgtctcaactctggcaggatttccagcaggtg
cagatctcggtcgataggctcggcgacatcctgaacaccccgacagagcgtcagccagcc
gcgcggttgtcgttgcctgcaccaaagggaaaaatcgattttcgaaacatcaccttccgt
tatcggcccggctcgccggaggtcctgaaaaacatatcgctcgaaataaagccgggagag
gtcatcggtatcgtcggaacctcgggctctgggaagtcgacgctcgcgaaactggtgcag
cgtctttatatccccgaagaggggcaggtccttcttgacggcatggatctctcccagctc
gatcccgcctggcttcgaagccacattggcgtcgttctccaggagaacctgctgttcaac
cggacgatccacgacaatatcgcgttctcaaacccagcgatgcagcgcgctcaggttatt
gcggtcgccaagctcgccggggcagatgaattcattttgcgaatgccgcacggctacgac
acgatgatcgaagagcgcggcgcgaacctgtccggtggccagcgtcagcggatcgccatt
gcccgtgcgcttgccaccgctcccccgatcctgattttcgatgaagcgaccagcgccctc
gactatgaaagcgagcgcgtcgtgcaaaccaacatgcgccagatcgccgccggcagaacg
gtcatcatcatcgcgcatcggctcgccgctgtgcggccttgcaaccggatcatcggcatg
gctggcggacgtatagttgaagtcggcagccatgacgatctgctcaagcgcccggagggg
ctctatgcgcgactttgggccttgcagaatgacagaggcgccgcgtga
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